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scnpilot_p_inoc_scaffold_579_38

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(45951..47189)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002378625 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 411.0
  • Bit_score: 760
  • Evalue 1.10e-216
  • rbh
ROK family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 416.0
  • Bit_score: 789
  • Evalue 1.90e-225
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 371.0
  • Bit_score: 618
  • Evalue 1.10e-174

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
TTGCCATCCACCCGCTGGAGTCACTGCGGCGCCGAAGACCTGGGCGTTTTGCAGACCATCTTCTGGTCCGCAGGCGCGTCGCGCAATGCGCTGGCGCAGCGCCTGGCCTATTCCAAGAGCAAGGCCAACGCCATGGTCGCGGCGCTGCTAGACGAAGGACTGCTCGACGAGGTGGGCCTGCAGGAATCCTCTGGCGGCAGGCGTGCCGAAACCCTTCGATTGAGCGAAACCCTGGGCGTGGTGATTGGCGCCGACCTGGGCGCCACCAGCATGCAGATAGCAGTGATGCGGCCCGACATGACGGTGCTGGCGCGGCACCGCGAGCCGATTGATGTGCGCCAGGGGCCGGGCGTGATCCTGGCGCGGGTGCGGGGGCTGATGCGCGAGCTGCTGGCGCGCTGCGGGCTGGCCGCCCACCAGGTGATTGCCATTGGTATGGGCGTGCCGGGGCCGGTGGATTTTGAAAGCGGGCAGCTCGTTAACCCGCCGCTGATGCCCGACTGGGACGGCTTTTCCATTCGCGACTACCTGCGCGAGGCGTTTGCCGCGCCGGTGTTTGTGGACAACGACGTGAACCTGATGGCGCTGGGCGAGATGTACCGGCTGCAGCGCAATCTCCCCAACTTTCTGGTCATCAAGGTGGGCACGGGCATTGGCTGCGGCATCGTGTGCCACGGGCAGGTGTACCGGGGCGCCAATGGATCGGCGGGCGATGTGGGCCACATCTGTGTGGATCAGCACGGCCCGCGCTGCCATTGCGGCAACCAGGGCTGTGTGGAGGCGATGGCCGCAGCGCCCGCCATGGCGCGCATGGCCACTGAGGCCGCGCAGCGCGGCGAAAGCGCGCTGCTGGCCGAGCGGCTGCAAAGCACCGGCACGCTGACGATTGAAGACGTGGCCCAGGCCAGCCGCACGGGCGATGTGGCGGCCAACGCCATCATCCAGCGCGCGGGCAGCCTGGTGGGGCAGATGCTGGCGTCCATCGTCAACTTCTTCAACCCGTCGCATGTGTTCATTGCGGGGCGGGTGACGGACATGGGGCCGCTGTTCCTCGCGTCGGTGCGGCAGAGCGTGTACCACCGGTCGCTGGCGCTGTCGACGCGGCACCTGGAGATTCAATACGCGCCGCTGGCCGACGATGCCGGTGTGGTGGGCGCGGGCGTGCTGGCGATGCAGGAGAGCCTGTCGCGCGCGGGCTCGGTAACGAGCGCTGGCGTTGGTGCAGGGGTAGCGCGATGA
PROTEIN sequence
Length: 413
LPSTRWSHCGAEDLGVLQTIFWSAGASRNALAQRLAYSKSKANAMVAALLDEGLLDEVGLQESSGGRRAETLRLSETLGVVIGADLGATSMQIAVMRPDMTVLARHREPIDVRQGPGVILARVRGLMRELLARCGLAAHQVIAIGMGVPGPVDFESGQLVNPPLMPDWDGFSIRDYLREAFAAPVFVDNDVNLMALGEMYRLQRNLPNFLVIKVGTGIGCGIVCHGQVYRGANGSAGDVGHICVDQHGPRCHCGNQGCVEAMAAAPAMARMATEAAQRGESALLAERLQSTGTLTIEDVAQASRTGDVAANAIIQRAGSLVGQMLASIVNFFNPSHVFIAGRVTDMGPLFLASVRQSVYHRSLALSTRHLEIQYAPLADDAGVVGAGVLAMQESLSRAGSVTSAGVGAGVAR*