ggKbase home page
This organism can only be binned in the context of its binning project 2019_SCN_bioreactor_t1_biofilm. Please contact the project owner (coralline@gmail.com) to become a member and gain access.

scnpilot_p_inoc_scaffold_1013_7

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(3476..4723)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK07_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 415.0
  • Bit_score: 410
  • Evalue 1.70e-111
  • rbh
outer membrane protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 797
  • Evalue 6.90e-228
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 418.0
  • Bit_score: 376
  • Evalue 7.60e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAAACAGTGGATTACTATTGCGGGAACGGCCGTACTGATGATTCTGAGCGTACCTGCCGGTGCGTGGGTGACCGACTCCGCGCCCGAGTTGCTGCCAACACCCCTGGTCCGCCAGGCGATTGACCAGGACCCTTACGTAGTCGAAGCGCGCCGTGCCCTCGCCGCGGCTGGGCATGGCGCCGCGGCGTTGCGGTCCGGCTCGCACGAGTGGACTACCCGGGCCATCGTGCAAAGCCGACGGTATGACGCCGGCGGGCGCTCCAACGAATGGGAGGCCGGCCTTGAGCGTGCTTTGCGGATAGGCGGCAAAGCCAGGCTGGACGGCGACATCGGCGAAGTAGAGATCGCAATTGCGCAGGCAAAATTGGGCGAAGCGATCCATGAGTCCGCGAGGGCGCTTGCCGACCTGTGGATGGATGTTATCGCCGCTCGCCGGCTCAAGGAGGTGATCGGTGAGCAAAGGGGCTTTGCACAGGAAAGCCTCAAGGCCGTGGAAAGCCGCCGCAAAGCGGGGGATGCCTCGGTGCTGGACGTCAACCTGGCCACGACCGATCTGGTTGAGATGGACCGTCAGCTCAGTGCTGCAGGGACAGCCGAGGCAAAGGCCCATGCCAAGCTGAACTCGCGGTTTCCTCTGATCACCGAGCTTCCGAAACTCACTGTTGATCCCAGGCCGCTGGAGACTGGGCAAGCACAATGGCGTGAGCGCATTCTGGCCGAGAGCGACCCGATCCGCATTGCTGAAGGCCAGGCCCGCAAAGCCGCCCTGTCAGCGGACCGCATGCGAGCCGACCGAACGCCCGATCCCACCGTGGGGGTCTTTGTCGCTTCGGAGGCCAGGCGCAGCGAGCGCATCTACGGCGTGAGTGTCAGCATCCCCTTGGCCGGCACCTACCGCAACGAACGCATGCTGCAGGCCCTGCAGGAGGCGGAAGCCGCCCGCGCACGGCTAGATGGCAAGCGTCGCGAGATGGAGATGGAGGTCGCTGAGACCTACATCGATGCCATGGGCAGCTTCGAGCGCTGGCGCCTGACCTCGCAAGGGCTGTCGGCGACCCAGAGCAGCGCCCGTTTGACCCAGCGTGCCTACAGCCTTGGAGAGGTGGACTTACAAGGCCTGCTGCTGGCCCGTAAGCAAGGCCTGGATGCCACCATGGCAGCCGAGCAGGCCCGCATCGAAGCCCTGCGTGCGCAGGGCCGGCTGATGATCGACGCCCATTTGGTCTGGGGGCTGGAGGAAGATTGA
PROTEIN sequence
Length: 416
MKQWITIAGTAVLMILSVPAGAWVTDSAPELLPTPLVRQAIDQDPYVVEARRALAAAGHGAAALRSGSHEWTTRAIVQSRRYDAGGRSNEWEAGLERALRIGGKARLDGDIGEVEIAIAQAKLGEAIHESARALADLWMDVIAARRLKEVIGEQRGFAQESLKAVESRRKAGDASVLDVNLATTDLVEMDRQLSAAGTAEAKAHAKLNSRFPLITELPKLTVDPRPLETGQAQWRERILAESDPIRIAEGQARKAALSADRMRADRTPDPTVGVFVASEARRSERIYGVSVSIPLAGTYRNERMLQALQEAEAARARLDGKRREMEMEVAETYIDAMGSFERWRLTSQGLSATQSSARLTQRAYSLGEVDLQGLLLARKQGLDATMAAEQARIEALRAQGRLMIDAHLVWGLEED*