ggKbase home page

SCNpilot_cont_300_bf_scaffold_66

Search features with annotation key words

Displaying items 31-60 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_66_31
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31986..33383
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO96697.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ens
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_32
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33477..35192)
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036368A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG57795.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
SCNpilot_cont_300_bf_scaffold_66_33
unknown

Not on your lists

comp(35317..35817)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_66_34
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35886..36824)
DNA (939bp) protein (313aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A214_ORNRL rbh
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFL97998.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornit
SCNpilot_cont_300_bf_scaffold_66_35
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36889..37443)
DNA (555bp) protein (185aa)
DNA-3-methyladenine glycosylase I n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W723_9FLAO
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KFC20162.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithon
methyladenine glycosylase
SCNpilot_cont_300_bf_scaffold_66_36
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37472..38122)
DNA (651bp) protein (217aa)
Semialdehyde dehydrogenase family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN12_9FLAO
Semialdehyde dehydrogenase family protein {ECO:0000313|EMBL:EJL74984.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source
uncharacterized protein
SCNpilot_cont_300_bf_scaffold_66_37
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38129..39172)
DNA (1044bp) protein (348aa)
Beta-lactamase domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1E9_SPHS2
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78819.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="P
beta-lactamase
SCNpilot_cont_300_bf_scaffold_66_38
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39273..40280)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW38_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF15842.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_39
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40337..40861)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037F767E
Uncharacterized protein {ECO:0000313|EMBL:KFF12822.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_66_40
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40947..41705)
DNA (759bp) protein (253aa)
HEAT domain containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ63_PEDHD rbh
HEAT domain-containing protein
HEAT domain containing protein {ECO:0000313|EMBL:ACU02545.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
SCNpilot_cont_300_bf_scaffold_66_41
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41803..42105
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V4F2_9BACT
Antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AJW63548.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Eliz
SCNpilot_cont_300_bf_scaffold_66_42
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42102..42674)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000365BCD8
Uncharacterized protein {ECO:0000313|EMBL:KGO93599.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sub
fnr5; cyclic nucleotide binding regulatory protein
SCNpilot_cont_300_bf_scaffold_66_43
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42744..43343
DNA (600bp) protein (200aa)
Appr-1-p processing domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNK9_CHIPD rbh
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACU64109.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitino
SCNpilot_cont_300_bf_scaffold_66_44
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43451..44062)
DNA (612bp) protein (204aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRL3_DYAFD rbh
NAD(P)H dehydrogenase (quinone)
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ACT92716.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (st
SCNpilot_cont_300_bf_scaffold_66_45
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44287..44538
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C0F0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC89749.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_46
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(44628..45173)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A7D89
hypothetical protein Tax=CG_Ignavi_02
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_47
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45420..47687
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWH0_9SPHI rbh
Putative dipeptidyl anminopeptidase {ECO:0000313|EMBL:KGE16175.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source
dipeptidyl anminopeptidase
SCNpilot_cont_300_bf_scaffold_66_48
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

47992..49062
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2ECW9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJJ39178.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_49
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49228..50652)
DNA (1425bp) protein (475aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
protein rtcB n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000345777B rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_50
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50720..52957)
DNA (2238bp) protein (746aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2D1_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK00166.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_51
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53795..54823
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036C6B65 rbh
Transcriptional regulator {ECO:0000313|EMBL:KGO87572.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium r
putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_66_52
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54841..55245)
DNA (405bp) protein (135aa)
Phage envelope protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C4T9_9FLAO
Phage envelope protein {ECO:0000313|EMBL:KFF21519.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
uncharacterized protein
SCNpilot_cont_300_bf_scaffold_66_53
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55299..55745)
DNA (447bp) protein (149aa)
Glyoxalase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8G0_9FLAO
Glyoxalase family protein {ECO:0000313|EMBL:EFK33688.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteriu
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_cont_300_bf_scaffold_66_54
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55889..56233
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KQP2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL75378.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" sourc
SCNpilot_cont_300_bf_scaffold_66_55
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56256..57527
DNA (1272bp) protein (424aa)
Sodium/hydrogen exchanger n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE22_CHIPD rbh
Sodium:proton exchanger {ECO:0000313|EMBL:KFF25784.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
sodium/hydrogen exchanger
SCNpilot_cont_300_bf_scaffold_66_56
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57578..58288
DNA (711bp) protein (237aa)
Thioredoxin family protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S223_9FLAO
Thioredoxin {ECO:0000313|EMBL:KFC22401.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Thioredoxin family protein
SCNpilot_cont_300_bf_scaffold_66_57
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

58351..59016
DNA (666bp) protein (222aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJL5_NIAKG
3-phosphoshikimate 1-carboxyvinyltransferase
SCNpilot_cont_300_bf_scaffold_66_58
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59099..59485)
DNA (387bp) protein (129aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRI1_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphin
single-strand binding protein
SCNpilot_cont_300_bf_scaffold_66_59
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

59677..60048
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A2FB5
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_66_60
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

60133..60936
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000365CD9E
hydrolase with alpha/beta fold
Hydrolase with alpha/beta fold {ECO:0000313|EMBL:ABG59705.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strai
Displaying items 31-60 of 235 in total

View Taxonomy