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SCNpilot_cont_300_bf_scaffold_66_63

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 62433..63029

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F8382 similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 190.0
  • Bit_score: 168
  • Evalue 7.00e-39
RNA polymerase subunit sigma-70 similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 1.20e-39
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AKD54758.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 5.70e-39

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
TTGAGTAGACAAGTGATTTATACAGACCAGGAGCTGATAGCAGGCCTGGCACAGAGCGATAGTCATGTCATTGGTGAGATATATAAGTTATATCAACCCATGTTGACCAAATGGATGATCAGCAGGGGGGGGAATGAAACAGATGCTTATGACGTTTTCCAGGAAGGACTGGTAGTGCTTTATGAGAAATCAAATGATGAGGCTTTCTGCCTCACCTGTAAATTAAGCACTTACCTGTTTGCTATCTGTAAACGGATATGGTTTAAGAAAAGCCAGTCCCAAAGTGTGATCAGCAGCCTGGATATGGAGCAGGAAGGTGAAGAGGATGATGACCTGGACTTTGCAGCGTATGATGCCGACCTGAATGTACACCTGGAAAAGGAAGCCCATTTGAATAAACTGGAGCAATCCCTGGAACAGCTGGGCAGCCCCTGTAACGAATTATTGAAAGCATTCTATATAGAAGATAAAAGTATGCTGGAAATAGCACAGCAATTCAGCTATACCAATGCTGAAAATGCTAAAACACAAAAGTATAAATGCCTGAACAGGTTGAAAAAGCTCTTTTTTTCAACTAAAATGGCCTTAAATGTATAA
PROTEIN sequence
Length: 199
LSRQVIYTDQELIAGLAQSDSHVIGEIYKLYQPMLTKWMISRGGNETDAYDVFQEGLVVLYEKSNDEAFCLTCKLSTYLFAICKRIWFKKSQSQSVISSLDMEQEGEEDDDLDFAAYDADLNVHLEKEAHLNKLEQSLEQLGSPCNELLKAFYIEDKSMLEIAQQFSYTNAENAKTQKYKCLNRLKKLFFSTKMALNV*