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SCNpilot_cont_300_bf_scaffold_284_112

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(140886..141320)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE90_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 181
  • Evalue 4.50e-43
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 181
  • Evalue 1.30e-43
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ADY54012.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 181
  • Evalue 6.20e-43

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 435
ATGGCAGATACTTTTAATAAGAAAGCATTACAACAAAAAAGAGCAAAAAAGAAGCAAGATAAACTCGAAAAGAGGGAAGAGAGAAAAGTAAATAACGATAAAGGGAAAAGTCTGGAAGAAATGACGGTTTATCTCGATGAGTTTGGTAACTTTACAGACGTTCCGCCTGAACAACAGAAGAGAAAGAAGATAAATTCAAAAGATATATTGTTGGGCGCGACACCAATTACAGAACAAAAAGAACACACAGGTGTATTATCTTTGTTCTTTGCAGATAAAGCTTACGGTTTTATTACGGAAGATGAAACCAGAGAGACTATATTTGTACACAGTAACAAAATGTTAGAACCGATTACTGAAAAAGACAAGGTGAGCTATGAGAAAGAGAAAACACCGAAAGGTTTCGCAGCTGTCAACGTCAGAAAAATAAAATAA
PROTEIN sequence
Length: 145
MADTFNKKALQQKRAKKKQDKLEKREERKVNNDKGKSLEEMTVYLDEFGNFTDVPPEQQKRKKINSKDILLGATPITEQKEHTGVLSLFFADKAYGFITEDETRETIFVHSNKMLEPITEKDKVSYEKEKTPKGFAAVNVRKIK*