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SCNpilot_cont_300_bf_scaffold_25_32

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_73_43

near complete RP 50 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(38391..38948)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI47_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 176.0
  • Bit_score: 173
  • Evalue 2.00e-40
RNA polymerase {ECO:0000313|EMBL:KGM12672.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 183.0
  • Bit_score: 209
  • Evalue 3.60e-51
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 176.0
  • Bit_score: 173
  • Evalue 5.70e-41

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Taxonomy

Cellulomonas carbonis → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCAGGCACAGCCGAAGCCGGCCGGCGAGGATGCCGTCGAGCATCTCGCCGTGCTCCCGGTCCCCGGCGGTGCCGAGGCGGAGTTCGCCGACTTCGTGCGTGCGTCGTCCGCCGAGCTGGGCCGTGTCGCGTGGTTCCTCTGCGGCGACCGCACACGCGCCGAGGACCTGCTCCAGCACGCCTACCTGCGCACGTGGTCGCACTGGGGCCGGGTGCGCACCGGAGACCCGGTCGCCTACACGCGCCGCGTGCTCGCGAACGCCCGCATCGACGCGTGGCGGCTCGCGCGGCGGGAGGTGCTGTCCCCCGCCGTGCCGGAGGGTGCTGTCCCGTCCGGCGCGGCGGCGACCGACGAGCGGGACGCCCTGGTGCGCGCGCTGCGGCTGCTGCCGCCGCGGCAGCGCCGGATCGTCGTGCTGCGTCACCTCGCCGGGCTGACCGAGGTCGAGGTGGCCGACGAGCTGCGCGTCAGCGTCGGCACGGTCAAGGCGGCCGCCTCACGCGGGCTCGCGCGCCTGCGCACCGAGCTGTCGGACGACGAAGGAGGGGCCCGATGA
PROTEIN sequence
Length: 186
MQAQPKPAGEDAVEHLAVLPVPGGAEAEFADFVRASSAELGRVAWFLCGDRTRAEDLLQHAYLRTWSHWGRVRTGDPVAYTRRVLANARIDAWRLARREVLSPAVPEGAVPSGAAATDERDALVRALRLLPPRQRRIVVLRHLAGLTEVEVADELRVSVGTVKAAASRGLARLRTELSDDEGGAR*