ggKbase home page

SCNpilot_solid_1_scaffold_15

Search features with annotation key words

Displaying items 121-150 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_15_121
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(148824..152075)
DNA (3252bp) protein (1084aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F6084 rbh
Putative cytochrome c {ECO:0000313|EMBL:EPR69614.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11
membrane-bound dehydrogenase domain-containing protein
SCNpilot_solid_1_scaffold_15_122
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152342..153958)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H6J7_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR96794.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
SusD/RagB family lipoprotein
SCNpilot_solid_1_scaffold_15_123
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153970..157350)
DNA (3381bp) protein (1127aa)
TonB-dependent receptor n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GZ74_9SPHI rbh
TonB-dependent receptor {ECO:0000313|EMBL:EOR96795.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
TonB-linked outer membrane protein, SusC/RagA family
SCNpilot_solid_1_scaffold_15_124
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(157549..158754)
DNA (1206bp) protein (402aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC73_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00380.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
SCNpilot_solid_1_scaffold_15_125
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158939..159526)
DNA (588bp) protein (196aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH42_9SPHI
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM35123.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" sou
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_solid_1_scaffold_15_126
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(159701..161053)
DNA (1353bp) protein (451aa)
Amidohydrolase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0M2_DYAFD rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACT93628.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827
SCNpilot_solid_1_scaffold_15_127
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(161232..163625)
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003619B0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV83049.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
SCNpilot_solid_1_scaffold_15_128
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(163633..166047)
DNA (2415bp) protein (805aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003726C30
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein
SCNpilot_solid_1_scaffold_15_129
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(166440..167894)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003674DA7
RagB/SusD family protein Tax=GWA2_Bacteroidetes_40_15_curated
putative outer membrane protein
SCNpilot_solid_1_scaffold_15_130
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(167998..171543)
DNA (3546bp) protein (1182aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381D752
TonB-dependent receptor plug Tax=GWA2_Bacteroidetes_40_15_curated
TonB-dependent receptor
SCNpilot_solid_1_scaffold_15_131
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(171699..172952)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D3DA2 rbh
Putative anti-sigma factor {ECO:0000313|EMBL:GAO42724.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
anti-FecI sigma factor FecR
SCNpilot_solid_1_scaffold_15_132
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173069..173659)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371FC67
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00296.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
SCNpilot_solid_1_scaffold_15_133
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(173736..176024)
DNA (2289bp) protein (763aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B000C rbh
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AKD05421.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_solid_1_scaffold_15_134
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(176223..177608)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624BDC
oxidoreductase domain-containing protein Tax=GWA2_Bacteroidetes_40_15_curated
oxidoreductase domain-containing protein
SCNpilot_solid_1_scaffold_15_135
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177700..178584)
DNA (885bp) protein (295aa)
Putative Tat (Twin-arginine translocation) pathway signal sequence containing protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HSI0_9BACT rbh
xylose isomerase domain-containing protein Tax=GWB2_Bacteroidetes_41_8_curated
xylose isomerase domain-containing protein
SCNpilot_solid_1_scaffold_15_136
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

178796..181612
DNA (2817bp) protein (939aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3E66E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77734.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
SCNpilot_solid_1_scaffold_15_137
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

181920..182804
DNA (885bp) protein (295aa)
ATP synthase gamma chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR0_NIAKG rbh
ATP synthase F1 subcomplex subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=7005
SCNpilot_solid_1_scaffold_15_138
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

182888..183751
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFFB0 rbh
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
chromosome segregation and condensation protein ScpB
SCNpilot_solid_1_scaffold_15_139
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

183861..185153
DNA (1293bp) protein (431aa)
AMP-dependent synthetase and ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ97_9SPHI rbh
phenylacetate--CoA ligase
Phenylacetate--CoA ligase {ECO:0000313|EMBL:AHF15869.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19
SCNpilot_solid_1_scaffold_15_140
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

185226..186800
DNA (1575bp) protein (525aa)
Phenylalanine/histidine ammonia-lyase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1I1_9SPHI rbh
Phenylalanine/histidine ammonia-lyase {ECO:0000313|EMBL:EHQ30855.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" sourc
histidine ammonia-lyase
SCNpilot_solid_1_scaffold_15_141
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

186945..187673
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1I0_9SPHI rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHQ30854.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" sou
3-ketoacyl-ACP reductase
SCNpilot_solid_1_scaffold_15_142
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

187882..189081
DNA (1200bp) protein (400aa)
beta-ketoacyl synthase n=1 Tax=Niabella aurantiaca RepID=UPI0003729144 rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:KIC95142.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter
beta-ketoacyl synthase
SCNpilot_solid_1_scaffold_15_143
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

189090..189350
DNA (261bp) protein (87aa)
Acyl carrier protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQS3_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; S
acyl carrier protein
SCNpilot_solid_1_scaffold_15_144
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

189350..190237
DNA (888bp) protein (296aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY1_CHIPD rbh
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ACU59353.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chiti
SCNpilot_solid_1_scaffold_15_145
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(190575..190991)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003603EE8
Uncharacterized protein {ECO:0000313|EMBL:EOS06976.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;
hypothetical protein
SCNpilot_solid_1_scaffold_15_146
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(190988..191227)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLT0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17304.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_15_147
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(191628..192749)
DNA (1122bp) protein (374aa)
ABC transporter permease protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPZ0_9SPHI rbh
ABC transporter permease protein {ECO:0000313|EMBL:EOR93595.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arct
ABC transporter permease
SCNpilot_solid_1_scaffold_15_148
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(192746..193852)
DNA (1107bp) protein (369aa)
ABC transport system, permease component YbhR n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPG1_9SPHI rbh
ABC transport system, permease component YbhR {ECO:0000313|EMBL:EOR93596.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;"
ABC transporter rbh
SCNpilot_solid_1_scaffold_15_149
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(193869..194612)
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP37_9SPHI rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOR93597.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;"
ABC transporter
SCNpilot_solid_1_scaffold_15_150
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(194612..195568)
DNA (957bp) protein (319aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Arcticibacter svalbardensis MN12-7 PF7_9SPHI">RepID=R9GPF7_9SPHI rbh
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:EOR93598.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;"
sulfate-transporting ATPase
Displaying items 121-150 of 176 in total

View Taxonomy