ggKbase home page

SCNpilot_solid_1_scaffold_100

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_100_31
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25942..26334)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B33CC
Uncharacterized protein {ECO:0000313|EMBL:CDE65212.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
hypothetical protein
SCNpilot_solid_1_scaffold_100_32
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26472..27644
DNA (1173bp) protein (391aa)
Glycosyl transferase group 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQH5_NIAKG
N-acetyl-alpha-D-glucosaminyl L-malate synthase {ECO:0000313|EMBL:KIC95288.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;
group 1 glycosyl transferase
SCNpilot_solid_1_scaffold_100_33
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27690..28463
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003605CF0
Hydrolase TatD {ECO:0000313|EMBL:KIC95269.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisil
TatD family hydrolase
SCNpilot_solid_1_scaffold_100_34
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28465..29508
DNA (1044bp) protein (348aa)
L-asparaginase, type I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDC4_CHIPD rbh
1-alkyl-2-acetylglycerophosphocholine esterase {ECO:0000313|EMBL:KIC90654.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
type I L-asparaginase rbh
SCNpilot_solid_1_scaffold_100_35
unknown

Not on your lists

29509..29667
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_100_trna_1
unknown

Not on your lists

29566..29652
DNA (87bp)
transferRNA
SCNpilot_solid_1_scaffold_100_36
unknown

Not on your lists

29865..30056
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_100_37
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30291..31187)
DNA (897bp) protein (299aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Flavobacterium sp. CF136 RepID=J2SBN6_9FLAO rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL62767.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" s
transcriptional regulator rbh
SCNpilot_solid_1_scaffold_100_38
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31343..32200
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003797949 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC90509.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_100_39
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32389..33441
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364E5D9
SMP-30/Gluconolaconase/LRE-like region-containing protein
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AHG89801.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_solid_1_scaffold_100_40
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33466..35187
DNA (1722bp) protein (574aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDT3_RHOMR
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AEN72453.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
SCNpilot_solid_1_scaffold_100_41
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35537..36211
DNA (675bp) protein (225aa)
carboxymuconolactone decarboxylase n=1 Tax=Niabella aurantiaca RepID=UPI00037197A8 rbh
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AHF14839.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella so
SCNpilot_solid_1_scaffold_100_42
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36232..37341
DNA (1110bp) protein (370aa)
peptidase S15 n=1 Tax=Niabella aurantiaca RepID=UPI00037E9FEC rbh
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:AHF14837.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_solid_1_scaffold_100_43
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37353..37841
DNA (489bp) protein (163aa)
Cupin n=1 Tax=Galbibacter marinus RepID=K2PZU6_9FLAO
Cupin {ECO:0000313|EMBL:KIA84134.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
cupin
SCNpilot_solid_1_scaffold_100_44
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37875..38858
DNA (984bp) protein (328aa)
Pyridoxine 4-dehydrogenase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEM1_SPHS2 rbh
Aldehyde oxidase {ECO:0000313|EMBL:KIC92010.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. Z
aldehyde oxidase rbh
SCNpilot_solid_1_scaffold_100_45

Not on your lists

39051..40106
DNA (1056bp) protein (352aa)
Zn-dependent alcohol dehydrogenase (EC:1.-.-.-)
alcohol dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035E6B5D rbh
Alcohol dehydrogenase GroES-like domain protein {ECO:0000313|EMBL:AIA16989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_solid_1_scaffold_100_46
unknown

Not on your lists

40160..40381
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_100_47
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40709..41617
DNA (909bp) protein (303aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQC1_EMTOG rbh
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AFK01874.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticici
SCNpilot_solid_1_scaffold_100_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41932..42699
DNA (768bp) protein (256aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC7_NIAKG rbh
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEW02766.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_100_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42765..42989)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CF779
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02767.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_100_50
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43070..44803
DNA (1734bp) protein (578aa)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL71_NIAKG rbh
NAD+ synthetase {ECO:0000313|EMBL:KIC89168.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG
NH(3)-dependent NAD(+) synthetase
SCNpilot_solid_1_scaffold_100_51
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44921..46741
DNA (1821bp) protein (607aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEW02796.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AEW02796.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriale
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003619E4B
asparagine synthase
SCNpilot_solid_1_scaffold_100_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46779..47219)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02795.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_100_53
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47529..48668
DNA (1140bp) protein (380aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ACU57992.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ACU57992.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Cystathionine gamma-lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG09_CHIPD
cystathionine gamma-synthase
SCNpilot_solid_1_scaffold_100_54
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48674..49450
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02793.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_100_55
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49453..49776
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1M180_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO42406.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_100_56
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49799..50143
DNA (345bp) protein (115aa)
Arsenate reductase and related n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0Q1_PEDHD
Contig14, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78389.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
arsenate reductase-like protein
SCNpilot_solid_1_scaffold_100_57
unknown

Not on your lists

50176..50700
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_100_58
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50845..51471
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD1_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastell
SCNpilot_solid_1_scaffold_100_59
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51685..54561)
DNA (2877bp) protein (959aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sph
carbamoyl phosphate synthase large subunit n=1 Tax=Niabella aurantiaca RepID=UPI0003613024 rbh
carbamoyl phosphate synthase large subunit
Displaying items 31-60 of 111 in total

View Taxonomy