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SCNpilot_solid_1_scaffold_14_78

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 107672..108253

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8B4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 139
  • Evalue 3.40e-30
Uncharacterized protein {ECO:0000313|EMBL:KEQ30102.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antar similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 192.0
  • Bit_score: 171
  • Evalue 1.50e-39
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 139
  • Evalue 9.60e-31

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGCTTGCCCATAATGTACATAGCGATACCAATCTGCTGCAATCATTGAGGTCTGGTGACCAGTCTGCATTTAAAGCACTCTACGAATTATATGCAGCATCATTAACGGGTTACGCGGCCTCCAGGTTAGCTTCTCTTGAAGAAGCCCGGGATATCATACACGATCTTTTTGTATATATATGGGATGAAAGAGCCAGCATTACCATCACCACTTCTTTCAAGTCATTTCTTTTTGCTGCCGTGCGATATCGCATTATTGATCATATCCGTAAAAATATCACCCGTCGTGAGTATGCAGAAATGACGCAACGTCTTACTAATGATTTTATTGATAATACAGAAGATGAATTGAGTGTTAAAAATCTTAATCAAACACTGGAACTGGCAGTAAACAACCTTCCTTCACGTACAAGAGAAATATACCGGTTGAGCCGCCACCGGCAGTTGGCTATTAAGGAAATTGCGTGCCAGCTTCATCTTTCTGAACAAACGGTAAAAAACCAACTTACCACAGCGCTCAGTTATCTCCGTATCTCATTGGAAAGATTGGCCGTGCTGACTATGTTGTTATTGTTGCATTAA
PROTEIN sequence
Length: 194
MLAHNVHSDTNLLQSLRSGDQSAFKALYELYAASLTGYAASRLASLEEARDIIHDLFVYIWDERASITITTSFKSFLFAAVRYRIIDHIRKNITRREYAEMTQRLTNDFIDNTEDELSVKNLNQTLELAVNNLPSRTREIYRLSRHRQLAIKEIACQLHLSEQTVKNQLTTALSYLRISLERLAVLTMLLLLH*