ggKbase home page

SCNpilot_solid_1_scaffold_423_29

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24814..26175)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineacea similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 451.0
  • Bit_score: 729
  • Evalue 3.30e-207
tryptophan synthase subunit beta n=1 Tax=Rudanella lutea RepID=UPI0003712D11 similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 452.0
  • Bit_score: 749
  • Evalue 1.70e-213
  • rbh
trpB; tryptophan synthase beta chain similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 451.0
  • Bit_score: 729
  • Evalue 6.60e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldilinea aerophila → Caldilinea → Caldilineales → Caldilineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCTACAAAGAAAAATTACTTTACAGGAAGCGGAGATACCAACGCATTGGTATAATATTATGGCCGACATGCCCAATAAACCGTTACCGCCTCTGCACCCCGGAACACAGCAACCCATTGGCCCTGAAGATTTGGCTCCGTTGTTCCCGATGGAATTGATTAAGCAGGAAGTGAGCGCCGAAAAGTGGATAGAAATTCCTGATGAAGTAAGAAACCTGTATTCCCTCTGGCGGCCTACTCCTATGTTCAGGGCATATAACCTTGAAAAAGCGCTGGGCACAAAATCTAAAATTTACTACAAGTATGAAGGTGGTAGCCCTGCGGGTTCACACAAGCCCAATACAGCCATTCCGCAGGCTTATTATAATAGGAAGGAAGGTGTAAAGAAGATCGCAACAGAAACAGGCGCCGGTCAGTGGGGCAGCGCATTGAGTTTTGCCTGTAAACTACTGGGAATAGAATGTGAAGTATTTATGGTAAGAGTGAGTTATGACGGAAAGCCTTACCGGAAAATTATGATGAACACCTGGGGAGCAACAGTACACGCTTCGCCCAGCAATTTAACCAACGCCGGAAGAAGCATACTGGAAAAAGACGCCAACTCGCCCGGTAGCCTGGGAATTGCTATTTCTGAAGCTGTAGAAGTGGCCGCCACGCATGACGACACCAAATATTCTTTGGGCAGCGTATTGAATCATGTATTAATGCACCAAACCATTATAGGGCTGGAATCATTGAAACAAATGGAAAAGGCAGGCGATTATCCTGATATTGTGGTGGCGCCTTTTGGTGGCGGATCAAATTTCGCGGGTATAGCATTTCCTTTCCTGCAAAATAATTTAACCGGCGGAAAAAAGATAAGAGCCATTGCAGTGGAACCTACTTCCTGCCCCAAATTAACGCGTGGTGTTTTCCGTTACGATTTTGGTGATACCGTTGGTATGACGCCACTAATTCCAATGTACACTTTGGGACATAATTTCATTCCATCGCCTATTCACGCGGGAGGCTTGCGGTATCATGGAGCAGGCGCCATTGTTAGCCAGTTATTGAAAGATGATATTATTGAAGCCGTTGCCATTAACCAAACGGAATGTTTTGATGCGGGTTTATTGTTCTCCGGTGCTGAAGGCATTATTCCTGCACCTGAAGCTACCCACGCCATTGCGGAAGTAATACGACAGGCCAAACGGGCAGATGAAGAAGGAATCTCCAAAACAATCCTGTTTAACCTGTGTGGTCATGGTCATTTTGATTTGAGTGCTTACGAGCAATACCTGAGCGGTAAATTGGTGGATTATGAAGTATCACAGGCGGATATCAATGCATCTTTAGCAGAGCTGAACACACCTGCTATTTAG
PROTEIN sequence
Length: 454
MLQRKITLQEAEIPTHWYNIMADMPNKPLPPLHPGTQQPIGPEDLAPLFPMELIKQEVSAEKWIEIPDEVRNLYSLWRPTPMFRAYNLEKALGTKSKIYYKYEGGSPAGSHKPNTAIPQAYYNRKEGVKKIATETGAGQWGSALSFACKLLGIECEVFMVRVSYDGKPYRKIMMNTWGATVHASPSNLTNAGRSILEKDANSPGSLGIAISEAVEVAATHDDTKYSLGSVLNHVLMHQTIIGLESLKQMEKAGDYPDIVVAPFGGGSNFAGIAFPFLQNNLTGGKKIRAIAVEPTSCPKLTRGVFRYDFGDTVGMTPLIPMYTLGHNFIPSPIHAGGLRYHGAGAIVSQLLKDDIIEAVAINQTECFDAGLLFSGAEGIIPAPEATHAIAEVIRQAKRADEEGISKTILFNLCGHGHFDLSAYEQYLSGKLVDYEVSQADINASLAELNTPAI*