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SCNpilot_solid_1_scaffold_156_68

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 69879..70460

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9D0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 192.0
  • Bit_score: 160
  • Evalue 1.40e-36
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM37761.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedo similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 192.0
  • Bit_score: 160
  • Evalue 2.00e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 189.0
  • Bit_score: 151
  • Evalue 2.40e-34

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGCATACCGATATCGCACTGCAAATAGAAATAGCTTCCGGAAGCCAGGCTGCTTTTCAACAACTTTTTGAAAGGTATCGCGGTAAATTGTACAATTATCTGATGTCCATAGTAAAATCCAAAGAAATTGCAGAAGAGATTGTGACAGATGTTTTTCTGAAGATATGGATGGGGCGGGAACTCATAACAGATATACAAAATATGGATGCTTTTTTGCGTAAGGTGGCCTGTAATAAAGCGCTGGATTTTTTGCGGATAGCATCACGCAAAGCTGCACTGCAAAAGCTGCTGAAGCGGGAAATAGAACTAACCAGAGAAAGGGAAGCCGATTACAAAATTCAGGAGCAGGAATGTAAAATGATTATAAACAGGGCTATTCAGCAACTTTCTCCGCAACGTCGCATGGTTTTTACCTTAAGTCGTATGGGGGGGCTCAGTTATGATGAGATAGCACAGCAGCTTAACCTTTCCCGTAATACCGTTCGTAATACAATGGCTGAAACGCTCCGTTCCATACGCACTTATCTTTGTAAAAATGAAATAACTCATCTTGTGCTGCTATTGATTTGGTTAAAACATTAG
PROTEIN sequence
Length: 194
MHTDIALQIEIASGSQAAFQQLFERYRGKLYNYLMSIVKSKEIAEEIVTDVFLKIWMGRELITDIQNMDAFLRKVACNKALDFLRIASRKAALQKLLKREIELTREREADYKIQEQECKMIINRAIQQLSPQRRMVFTLSRMGGLSYDEIAQQLNLSRNTVRNTMAETLRSIRTYLCKNEITHLVLLLIWLKH*