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SCNpilot_solid_1_scaffold_206_23

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26041..30333)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 999.99
  • Bit_score: 2510
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 999.99
  • Bit_score: 2510
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 999.99
  • Bit_score: 2510
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4293
ATGGCTATCAAAAAAGACAATCGCCCCAAGTCAAATTTTTCCAAGATTACGATCAGCCTGGCTTCTCCCGATGCCATCCTGGAGCGATCTTATGGTGAGGTTTTGAAGCCTGAAACCATTAACTATCGTACCTACAAGCCTGAAAGAGACGGTTTGTTCTGCGAAAGAATTTTTGGACCGGTAAAAGATTATGAATGCGCCTGCGGTAAGTATAAGCGTATCCGTTATAAGGGCATAGTTTGCGACCGCTGCGGTGTGGAAGTTACAGAAAAGAAAGTGCGCCGCGAAAGAATGGGGCATATCAAACTCGTTGTGCCCGTAGTGCATATATGGTATTTTAAAAGCCTTCCCAATAAAATCGGTTACCTGCTCGGTATCAGTTCCAAAAAAATGGAAAGCATTGTATACTACGAAAGATACGTAGTAATACAGCCAGGTGTACGCGAAGACCGTAATCTTAAGATGGGAGACCTTCTGCCCGAAGAAGAATACTTAGAGATATTGGAAAATCTTCCCAAAGACAATCAATATCTGCCGGATGATGACCCGCAGAAATTCATCGCAAAAATGGGTGCGGAAGCCATTCATGCCATGCTCGGACGAATTGACCTGGATCAGTTGAGTTACGACCTGCGCAATGCCGCCGCTACGGAAACTTCCCAGCAGCGTAAAGCCGATGCGTTAAAGCGTTTGAGTGTGGTGGAATCGTTCCGCGATGCCAATAGCCGAATTGAAAACCGCCCGGAATGGATGGTAATGCAGTATATACCTGTTATACCTCCCGAGCTTCGCCCGCTGGTACCTTTGGACGGTGGTCGTTTTGCTTCATCGGATCTGAATGATTTATACCGTCGTGTTATTATTCGTAATAACCGTTTAAAACGTCTGCTGGAGATCAAAGCGCCGGAAGTGATCCTGCGTAATGAAAAACGCATGCTCCAGGAGGCCATAGATTCTTTGTTTGATAACTCGCGCAAATCGAATGCCGTTAAGGCCGAAGGCGGACGTGCATTGAAATCGCTGAGTGATGTGCTTAAAGGTAAGCAGGGCCGTTTCCGTCAGAACCTTTTGGGTAAACGTGTTGACTATTCAGGACGTTCGGTAATTGTGGTAGGACCAGATTTGAAATTACATGAGTGCGGACTGCCAAAAGATATGGGCGCCGAATTATTTAAGCCTTTTATCATTCGTAAACTGATTGAAAGAGGCATTGTAAAAACAGTAAAAAGCGCACGGAAATTAGTTGATCGTAAAGAAGCTATAGTTTGGGATATCCTTGAAAATATTCTTAAAGGACATCCTATTATGCTGAACCGTGCCCCAACACTGCACCGTTTATCTATCCAGGCCTTTCAGCCAAAATTGGTAGAGGGAAAAGCGATACAGCTACATCCATTGGTTTGTTCTGCGTTCAACGCCGACTTTGATGGTGACCAAATGGCCGTTCACGTTCCGCTGAGCAGCGCCGCTATTTTGGAAGCACAGTTGCTCATGTTGTCATCGCACAATATACTTAACCCGCAGAATGGCACGCCTATTACCCTTCCTTCGCAGGACATGGTATTGGGTTTGTATTATATCTCGAAAGGCAAGAAGTCAACCGACACCGAAAAAGTAAAAGGAGAAGGCAAGCGTTTTTATAATGCAGAAGAGGTTATTATAGCATACAACGAAAATAAGGTTGACCTGCATGCTCATATAAAAGTTAAAGCTGCACTCCGTAAAGACAATGGTGAACTGGAAACGAAGCTTATTGATACAACGGTAGGCCGCGTGATCTTTAATCAGCATGTTCCTGAAGAAGTAGGATTTATAAATGCGTTGCTTACCAAAAAATCACTCAGGGAAATCATCGGTGACATTATTAAAATTACCAATGTTCCCAAAACCGCTAAATTCCTGGATGACATCAAACAACTGGGCTTCCGTACCGCATTCAGAGGTGGACTTTCCTTTAATATCAATGACCTTGTTATTCCGCAGTTGAAGCAGGAACTGGTTGAATCGGCTTCCGATGAAGTGAAAGAAGTTTGGGAAAACTACAACATGGGTCTTATCACCAATAACGAAAGGTACAACCAGATCATTGATATCTGGTCGCGTGTGGATACCCGCGTTACAGAAACGCTGATACGTGAAATGGCAACAGATAAACAAGGCTTCAACTCTGTTTATATGATGCTGGATTCGGGCGCCCGTGGTAGCAAGCAACAGGTAAAACAGTTGGCAGGAATCAGGGGGTTAATGGCTAAACCGCGTAAAAGTGGTTCTACCGGTTCGGAAATCATTGAAAATCCGATCTTATCCAACTTTAAAGACGGACTGAATGTATTGGAATATTTCATTTCAACCCATGGTGCACGTAAAGGTTTGGCCGATACCGCGTTAAAAACAGCGGATGCCGGTTACCTCACCCGTCGTTTGGTTGATGTGGCCCAGGATGTGGTAATTAATGAAGAAGATTGCGGCACCCTGCGAGGCATTGCCATCAGTGCTTTAAAGGATAATGAAGATATAGTAGAACCGTTGTACGATCGTATATTAGGACGTACTTCAGTACATGATGTTTACAATCCGGTAACAGATGAGCTCATTATAGGAGCAGGTGAACAAATTACAGAAGAAGTTGCCCATACCATTGAAGAAAGCGGAATTGAAACCGTGGAAATACGTTCTGTATTGACCTGCGAAAGCAAACGCGGTGTTTGTGTAAAATGCTACGGACTTAACCTGGCTACAGGTTACCTTGCCCAAAGAGGAGATGCGGTAGGTATTATTGCCGCCCAGTCTATTGGTGAACCAGGTACACAGTTAACCCTTCGTACCTTCCACGTGGGTGGTGTGGCAGGCTCAGCTACCGTTGATTCGCAGTTAGCCGCTAAGTTCGACGGCACCGTGCAGTTTGATGGATTGCGTACTGTAACCGCCGAAAATAACCAGGGCGAAAAAATCCAGATCGTAATTGGCCGCACAGGTGAATTGAGGATCATTGATGTGAAAAACGACAGGCTGCTTATTACCAATAATATTCCTTACGGCGCCACTTTAATGGTAAAAGATGGCCAAAAAGTAGAGAAAGGCGATATTATCTGCTCATGGGATCCATTTAATAATGTAATTATTTCTGAACAGGCGGGTACCATCAAGTTCGACAGTGTACAGGAAGGATTTACCTACCGCGAGGAAGCTGATGAACAAACAGGTCACCGTGAAAAAGTAGTAATTGAAACAAAAGATAAGACTAAAATACCAATGCTTTTGGTGGAGGGCAAGGAAATTAAAACATATAACCTTCCGGTAGGTTCGCATATTGTAGTTGATGAAACAGAAGAGGTTCGCGCCGGACAGGTACTGGTTAAAATTCCACGTGTATTGGGTAAGTTGCGTGATATTACCGGTGGCTTACCACGTGTAACGGAATTGTTTGAAGCGCGTAATCCGGGTAATCCTGCCATTGTTTCTGAAATTGACGGGGTAGTTTCCTTTGGCGTGGTTAAACGTGGCAACCGTGAGATTATCATTGAAGCCAAGGATGGCGTGGTAAAAAAATACTTAGTTCCCCTTACACGGCAGATCCTTGTACAGGATGGCGACTTTGTAAGAGCCGGTACGCCTTTGTCTGACGGGCAAACAGCTCCTGCTGATATTCTTAATATTAAGGGACCTTTTGCAGTGCAGGAATACGTGGTAAATGAAATTCAGGAAGTATACCGCCTGCAGGGGGTGCGCATAAATGATAAGCACATTGAGGTAATTGTAAGGCAGATGATGAAGAAGATTGAAATTGTTGAGCCGGGCGATACCAAGTTCCTGGAGGAAGACCTGGAAGACCGCTTTGAATTTATTGAAGAGAATGACTGGATATATGATAAAAAGGTAGTAACAGAGCCTGGTGATTCATCGAAACTGCGTGCAGGACAAATTGTAAGTTTACGCGAACTGCGTGAAGAAAACTCTATCCTTCGCAGGGGCGATAAAAAACTGGTAGAATTCAGGGACGCCAACCCTGCCACTTCTAAGCCGGTATTGCTGGGTATTACCAAAGCATCATTGGGTACGCATAGCTGGATATCTGCAGCGTCGTTCCAGGAAACGACCAAGGTGCTGAGCTCTGCCGCCATACAGGGAAAAACGGATGATATGCTCGGGTTGAAAGAGAATGTAATTACCGGTCACCCGATACCTGCTGGTACAGGACTGCGTGAGTTTGACAATGTAATAGTGGGCAGCAAGGAAGAGTACGAATTGTTGCAAACTACACGTGAGGCTATGAGCTTTGATGAAGAAGAATAA
PROTEIN sequence
Length: 1431
MAIKKDNRPKSNFSKITISLASPDAILERSYGEVLKPETINYRTYKPERDGLFCERIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIKLVVPVVHIWYFKSLPNKIGYLLGISSKKMESIVYYERYVVIQPGVREDRNLKMGDLLPEEEYLEILENLPKDNQYLPDDDPQKFIAKMGAEAIHAMLGRIDLDQLSYDLRNAAATETSQQRKADALKRLSVVESFRDANSRIENRPEWMVMQYIPVIPPELRPLVPLDGGRFASSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQEAIDSLFDNSRKSNAVKAEGGRALKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHECGLPKDMGAELFKPFIIRKLIERGIVKTVKSARKLVDRKEAIVWDILENILKGHPIMLNRAPTLHRLSIQAFQPKLVEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSSAAILEAQLLMLSSHNILNPQNGTPITLPSQDMVLGLYYISKGKKSTDTEKVKGEGKRFYNAEEVIIAYNENKVDLHAHIKVKAALRKDNGELETKLIDTTVGRVIFNQHVPEEVGFINALLTKKSLREIIGDIIKITNVPKTAKFLDDIKQLGFRTAFRGGLSFNINDLVIPQLKQELVESASDEVKEVWENYNMGLITNNERYNQIIDIWSRVDTRVTETLIREMATDKQGFNSVYMMLDSGARGSKQQVKQLAGIRGLMAKPRKSGSTGSEIIENPILSNFKDGLNVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINEEDCGTLRGIAISALKDNEDIVEPLYDRILGRTSVHDVYNPVTDELIIGAGEQITEEVAHTIEESGIETVEIRSVLTCESKRGVCVKCYGLNLATGYLAQRGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSATVDSQLAAKFDGTVQFDGLRTVTAENNQGEKIQIVIGRTGELRIIDVKNDRLLITNNIPYGATLMVKDGQKVEKGDIICSWDPFNNVIISEQAGTIKFDSVQEGFTYREEADEQTGHREKVVIETKDKTKIPMLLVEGKEIKTYNLPVGSHIVVDETEEVRAGQVLVKIPRVLGKLRDITGGLPRVTELFEARNPGNPAIVSEIDGVVSFGVVKRGNREIIIEAKDGVVKKYLVPLTRQILVQDGDFVRAGTPLSDGQTAPADILNIKGPFAVQEYVVNEIQEVYRLQGVRINDKHIEVIVRQMMKKIEIVEPGDTKFLEEDLEDRFEFIEENDWIYDKKVVTEPGDSSKLRAGQIVSLRELREENSILRRGDKKLVEFRDANPATSKPVLLGITKASLGTHSWISAASFQETTKVLSSAAIQGKTDDMLGLKENVITGHPIPAGTGLREFDNVIVGSKEEYELLQTTREAMSFDEEE*