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SCNpilot_solid_1_scaffold_300_39

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 40613..41470

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 1.20e-151
  • rbh
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 3.20e-152
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:AHF14910.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 285.0
  • Bit_score: 543
  • Evalue 1.60e-151

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGACAACTAAAAATTGCAACACAAATTACCAACCGCGATTCGCAGGCGGTTGAAAAATATCTGCAGGAAATATCTAAAATTTCTATGATCACACCAGAAGAAGAAACCGTGCTGGCACAGCGCATTAAAATGGGGGATCAGAGGGCTTTGGATAAATTGGTGCAGGCTAACCTCAGGTTTGTTGTTTCCGTTGCAAAACAATACCAGCACCAGGGGTTATCATTGAGTGATTTGATTAACGAGGGAAACTTAGGTTTAATTAAGGCTGCACAGCGATTTGATGAAACCAAAGGCTTTAAATTCATTTCTTATGCGGTTTGGTGGATCCGCCAGTCTATTTTACAAGCTTTGGCCGAACAGGGTCGTTTGGTACGTTTACCTCAAAATAAAATTGGCACTTACAATAAGGCCAATAAAGCTTATATGGCATTTGAACAGGAACATGAACGTGAACCGAGCACCGAAGAGCTGGCTGAACTGCTGGAAATGAGTGAAACCGAAATCAACAACATTTTTCAAAGTAATACCCGCCATACCTCATTAGATGCACCTGTGCACGAAGCAGAAGATGTGGCAATGGGCGACTTGCTGGAAGGTGGCGCAGAAACAGATGATGATGTAATGAAAGATTCTTTACGCAATGAAATTCGCAGAGTATTGAAATCACTAAGTCCACGTGAAGCTGAAATTGTGAATGCTTATTTTGGGCTGGATGGCGAAAATGGGGTTACAATTGAGCAAATCGGACAAAAATACGATCTTACCAAAGAACGCATTCGCCAGATCAAGGAAAGAGCGATCAAACGCCTTCAGAAAGCTCGTTACAGCAGCTCGCTAAAAGCGTACCTGGGATAA
PROTEIN sequence
Length: 286
MRQLKIATQITNRDSQAVEKYLQEISKISMITPEEETVLAQRIKMGDQRALDKLVQANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAYMAFEQEHEREPSTEELAELLEMSETEINNIFQSNTRHTSLDAPVHEAEDVAMGDLLEGGAETDDDVMKDSLRNEIRRVLKSLSPREAEIVNAYFGLDGENGVTIEQIGQKYDLTKERIRQIKERAIKRLQKARYSSSLKAYLG*