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SCNpilot_solid_1_scaffold_7507_4

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2110..2736

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDA7_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 130
  • Evalue 2.20e-27
signal transduction histidine kinase, nitrogen specific, NtrB similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 130
  • Evalue 6.30e-28
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:AEI47784.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 130
  • Evalue 3.10e-27

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
TTGTCGTTTTTTAAAAGCATTCAACTGAGCACCCCTGTTCCAGTCATGAAAGAAGGTTCCAGTCACGAAAAAAATGATCAATTTGTTACATCTTTGATTCATGAGATTCGAAATCCATTGGCGACTATCAAACTTGCGGTAGAAGTATTACAAAATATCAGCACCGATCATACGCAAAAAAGATATCTCGAAATGATCATGAAGAGTAATGAGCGAGTAAATGATATCATAACACACGCGCTGGCTTCATTTCAGCATGAGATAAATGTGTTAAGAGAATACCCCTTACATCAATTGGTAGAAGAAGTATTAAATGCAAATGCGGACAGATTTTTTCTCTCGCATGTTAAGATCACGAAAAATTATACACGCTTTGCTTCTGCTGTTTTGGTCAACCAGAAAGAAATAAAGACAGCGCTGACGAATATTATTATTAACGCCATAGAATCCTTGCCGGTATCTGGCGGTGAGTTAATTATTACAACAATAGCTGATGATGGAAAATGCACCCTGGTAATTGAAGACAATGGAACAGGAATAGAAAAAGAACATCTTAACAATATCTTCAGGGCGTATTTCACTACAAAACCTAAAGGCGTAGGCTTGGGTCTGCCGGTAACACTGTAA
PROTEIN sequence
Length: 209
LSFFKSIQLSTPVPVMKEGSSHEKNDQFVTSLIHEIRNPLATIKLAVEVLQNISTDHTQKRYLEMIMKSNERVNDIITHALASFQHEINVLREYPLHQLVEEVLNANADRFFLSHVKITKNYTRFASAVLVNQKEIKTALTNIIINAIESLPVSGGELIITTIADDGKCTLVIEDNGTGIEKEHLNNIFRAYFTTKPKGVGLGLPVTL*