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SCNpilot_solid_1_scaffold_7561_1

Organism: SCNPILOT_SOLID_1_Amoebophilus_asiaticus_double_35_7.2

megabin RP 51 / 55 MC: 16 BSCG 51 / 51 MC: 19 ASCG 13 / 38 MC: 1
Location: 2..2083

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=452471 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 693.0
  • Bit_score: 1234
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER59_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 693.0
  • Bit_score: 1234
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 693.0
  • Bit_score: 1234
  • Evalue 0.0

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2082
TTTACCCTTAAGGAATTAAACAATTTACAACTAGGAGACTATGTGGTACATATTGATCATGGTATTGCACGTTTTGCGGGGCTCAGTAAAGTGGAGGTAAATGATAAAGAACAAGAGGTATTGCGGCTTGTATATAAAGATAATGATGTGGTTTATCTTAGCTTACATGCTTTACACAAAATTTCCAAATATACAGGTAAAGAAGGGCTTGTTCCTACAATGAGTAAATTGGGCAGTACTGCCTGGGAACAGAAAAAGACAAAGGTAAAACATAAAGTACAAGTTATTGCCAAGGAGTTAATTCAGCTGTATGGTAAAAGAAAATATGCTCCTGGATTTGCCTTTAGTAAAGATACTTTTCTGCAAGCTGAAATGGAATCATCCTTTATGTATGAGGATACTTCTGATCAGGCAGCTGCTACTGCAGATGTTAAAAAGGATATGGAAATGCCACACCCTATGGATAGGCTGGTATGTGGTGATGTAGGGTTTGGAAAAACAGAGGTGGCTATCCGAGCCTCTTTTAAAGCTGTGCAAGACCGTAAACAGGTTGCCGTATTGGTGCCTACTACTATCTTAGCTTTACAACACTATGAATCTTTCAAAAATAGATTGTCTAACTTTCCTGTGACAATAGAATACATTAACCGATTTAAACCAAAAGAGGAAATTAAAAATATTCACCAAGCTTTAGCAGAGGGGAAGATAGACATACTAATTGGCACACATACTATTTTAAGCAAAACATTTCAGTTCAAAGATTTAGGATTATTGGTTGTTGATGAAGAACAGAAGTTTGGAGTGAAAGCTAAAGATCGTATTAAAGAATTCAAAGTAAATGTGGATGTGTTAACCCTTACTGCTACACCTATTCCTAGGACATTACATTTTTCATTGATGGGTGCTAGGGACCTAAGCATTATTGCTACTTCCCCTTCTAATAGACAGCCTGTACAAACGTCTATCAATACTTTCGATAAAAAAGTTATACAAGAAGCTATCCACTATGAAGTTCAACGTGGAGGGCAAGTATTCTTCGTACACAATCGAGTAGCAAATATTCGAGAAGTAGCGGATATGCTCCATAAACTAGTGCCTGAATACCGTATTGGTATAGCCCATGGACAAATGGATGGCGATCAACTAGAAAAGAAGATGCTTACTTTTATAGCTGGTGGTTATGATATTCTAGTTTCTACTAATATCATTGAGTCCGGGTTAGATATTCCTAATGCCAATACTATCATTATTAATGATAGTCATATGTTTGGTCTTTCAGATTTGCACCAACTGCGTGGTAGAGTAGGGAGGTCTAACAAAAAGGCTTTTTGCTATTTAATAGCCCCGCCTAATTCTAGTCTCACTGAAGAAGCACGAAAACGATTGGGTACTTTAGAGGAATTTACAGAGCTAGGAGATGGATTTAAAGTAGCTATGAGAGATTTAGATATCCGAGGCGCTGGTAACTTGTTGGGGGCAGAACAGAGTGGGTTTATAGCAGATGTAGGTTTTGAAGCCTATTGTAAGATTCTGGAAGAAGCAGTGCAAGAACTCAAAGAAAATGAGTTTAAAGAGTTATTTGCAGAAGAACTAGCCCGTAAAGGCCAGTTGGCTAACATAGATTGTACGCTTGAAACAGATTTAGAGTTATTAATACCTACTAGCTATGTTAGCAATGATACCGAACGCCTGAGACTTTATACTAAATTGGATAGTATAGAGAACGAGAAAGAATTAAAAATTTTTCAAAGTGAAGTGCAAGATAGATTTGGTACATTACCAACACCTGTTCAAGAACTTATTAAAGCCGTAAAACTTAGATGGATAGCTAAGAAGCTATGTTTGCAAAAGATAAGAATAAAAGATAACATTATGCGATGTTATTTTATTTCTTCTCCACCCAAAGCTATTTTTTCTGAAACGTTGACGCATATACTTAATTATGTACAAAAGTACCCTCAACGTTGTCAGCTAAAAGAACTCAAAAATCAACTAAGCTTGACTGTGTCCGCTATTAGAACTATAGAAGAAGCATATGAGATTTTAGAACTTTTAGCGAATGATAGTAAATCTCATGACTAA
PROTEIN sequence
Length: 694
FTLKELNNLQLGDYVVHIDHGIARFAGLSKVEVNDKEQEVLRLVYKDNDVVYLSLHALHKISKYTGKEGLVPTMSKLGSTAWEQKKTKVKHKVQVIAKELIQLYGKRKYAPGFAFSKDTFLQAEMESSFMYEDTSDQAAATADVKKDMEMPHPMDRLVCGDVGFGKTEVAIRASFKAVQDRKQVAVLVPTTILALQHYESFKNRLSNFPVTIEYINRFKPKEEIKNIHQALAEGKIDILIGTHTILSKTFQFKDLGLLVVDEEQKFGVKAKDRIKEFKVNVDVLTLTATPIPRTLHFSLMGARDLSIIATSPSNRQPVQTSINTFDKKVIQEAIHYEVQRGGQVFFVHNRVANIREVADMLHKLVPEYRIGIAHGQMDGDQLEKKMLTFIAGGYDILVSTNIIESGLDIPNANTIIINDSHMFGLSDLHQLRGRVGRSNKKAFCYLIAPPNSSLTEEARKRLGTLEEFTELGDGFKVAMRDLDIRGAGNLLGAEQSGFIADVGFEAYCKILEEAVQELKENEFKELFAEELARKGQLANIDCTLETDLELLIPTSYVSNDTERLRLYTKLDSIENEKELKIFQSEVQDRFGTLPTPVQELIKAVKLRWIAKKLCLQKIRIKDNIMRCYFISSPPKAIFSETLTHILNYVQKYPQRCQLKELKNQLSLTVSAIRTIEEAYEILELLANDSKSHD*