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SCNpilot_solid_2_scaffold_42

Search features with annotation key words

Displaying items 91-120 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_42_90
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97944..98288
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50989.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_42_91
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98285..99379
DNA (1095bp) protein (365aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; B
pyrD; dihydroorotate dehydrogenase PyrD (EC:1.3.5.2); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHK9_AFIFE rbh
SCNpilot_solid_2_scaffold_42_92
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99555..99938)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09556.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_42_93
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100086..101012
DNA (927bp) protein (309aa)
Methyltransferase type 11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y3_9BRAD rbh
Malonyl-CoA O-methyltransferase BioC {ECO:0000313|EMBL:CEG09555.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (C
hypothetical protein rbh
SCNpilot_solid_2_scaffold_42_94
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101059..102375
DNA (1317bp) protein (439aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUB6_AFIFE rbh
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter {ECO:0000313|EMBL:EKS29803.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
manganese transp
SCNpilot_solid_2_scaffold_42_95
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102382..105531)
DNA (3150bp) protein (1050aa)
sel1-like repeat protein (EC:3.5.2.6); K13582 localization factor PodJL rbh
Sel1 domain protein repeat-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y5_9BRAD rbh
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EFI50995.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
SCNpilot_solid_2_scaffold_42_96
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105782..106306
DNA (525bp) protein (175aa)
Transcriptional regulator, MarR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y6_9BRAD rbh
Homoprotocatechuate degradation operon regulator, HpaR {ECO:0000313|EMBL:CEG09552.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
MarR family transcriptional regulator
SCNpilot_solid_2_scaffold_42_97
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106397..107767
DNA (1371bp) protein (457aa)
Glutamate/cysteine ligase {ECO:0000313|EMBL:EFI50997.1}; EC=6.3.2.2 {ECO:0000313|EMBL:EFI50997.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
Glutamate/cysteine ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y7_9BRAD rbh
SCNpilot_solid_2_scaffold_42_98
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107914..108498
DNA (585bp) protein (195aa)
Apple domain-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y8_9BRAD rbh
PAN domain protein {ECO:0000313|EMBL:CEG09550.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease
hypothetical protein rbh
SCNpilot_solid_2_scaffold_42_99
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108508..109275)
DNA (768bp) protein (256aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] rbh
Signal peptidase I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Y9_9BRAD rbh
SCNpilot_solid_2_scaffold_42_100
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109272..110699)
DNA (1428bp) protein (476aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z0_9BRAD rbh
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:EFI51000.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
C69 family peptidase; K03568 TldD protein rbh
SCNpilot_solid_2_scaffold_42_101
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110801..111343)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL18_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29796.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
invasion associated locus B rbh
SCNpilot_solid_2_scaffold_42_102
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111778..112623
DNA (846bp) protein (282aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
coxB; cytochrome c oxidase subunit 2 (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z2_9BRAD rbh
SCNpilot_solid_2_scaffold_42_103
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112689..114314
DNA (1626bp) protein (542aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:AEI07939.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEI07939.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
Cytochrome c oxidase subunit 1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JDB6_OLICO rbh
SCNpilot_solid_2_scaffold_42_104
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114412..115353
DNA (942bp) protein (314aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB; protoheme IX farnesyltransferase CtaB (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] rbh
Protoheme IX farnesyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUA9_AFIFE rbh
SCNpilot_solid_2_scaffold_42_105
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115361..115531
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09543.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
CoxF protein
SCNpilot_solid_2_scaffold_42_106
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115533..116150
DNA (618bp) protein (206aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z6_9BRAD rbh
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
cytochrome C oxidase assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11 rbh
SCNpilot_solid_2_scaffold_42_107
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116205..117062
DNA (858bp) protein (286aa)
cytochrome c oxidase subunit 3 (EC:1.9.3.1); K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z7_9BRAD rbh
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:CEG09541.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
SCNpilot_solid_2_scaffold_42_108
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117201..118097
DNA (897bp) protein (299aa)
Surfeit locus 1 family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6Z9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09539.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_42_109
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118223..119638
DNA (1416bp) protein (472aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] rbh
Threonine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V700_9BRAD rbh
Threonine synthase {ECO:0000313|EMBL:CEG09538.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease
SCNpilot_solid_2_scaffold_42_110
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119638..120927
DNA (1290bp) protein (430aa)
Processing peptidase {ECO:0000313|EMBL:EFI51011.1}; EC=3.4.24.64 {ECO:0000313|EMBL:EFI51011.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
Processing peptidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V701_9BRAD rbh
hypothetical protein zinc protease SCO5738 rbh
SCNpilot_solid_2_scaffold_42_111
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121030..121617
DNA (588bp) protein (196aa)
putative ribosomal-protein-alanine acetyltransferase; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQP0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29785.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_42_112
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121757..122446
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NN20_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29784.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
lipoprotein rbh
SCNpilot_solid_2_scaffold_42_113
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122639..123124)
DNA (486bp) protein (162aa)
atpF; ATP synthase subunit b; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Afipia sp. 1NLS2 RepID=D6V704_9BRAD
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
SCNpilot_solid_2_scaffold_42_114
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123129..123683)
DNA (555bp) protein (185aa)
atpG1; ATP synthase subunit b/b'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Afipia sp. 1NLS2 RepID=D6V705_9BRAD rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
SCNpilot_solid_2_scaffold_42_115
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123749..123976)
DNA (228bp) protein (76aa)
hypothetical protein (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATPase, F0/V0 complex subunit C n=4 Tax=Bradyrhizobiaceae RepID=B6JDC9_OLICO
ATP synthase subunit C {ECO:0000313|EMBL:EKS29781.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_42_116
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124024..124767)
DNA (744bp) protein (248aa)
atpB; ATP synthase subunit a; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
ATP synthase subunit a n=1 Tax=Afipia sp. 1NLS2 RepID=D6V707_9BRAD rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_solid_2_scaffold_42_117
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124833..125294)
DNA (462bp) protein (154aa)
FoF1 ATP synthase, subunit I n=2 Tax=Oligotropha carboxidovorans RepID=B6JDD1_OLICO
hypothetical protein; K02116 ATP synthase protein I
Uncharacterized protein {ECO:0000313|EMBL:AEI07925.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_42_118
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125480..126103
DNA (624bp) protein (208aa)
DSBA oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V709_9BRAD rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EFI51019.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DSBA oxidoreductase
SCNpilot_solid_2_scaffold_42_119
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126126..126668
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V710_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09527.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
Displaying items 91-120 of 194 in total

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