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SCNpilot_solid_2_scaffold_47_6

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(4115..6463)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666684 species="Bacteria; Proteobacteria; Alph similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 782.0
  • Bit_score: 1431
  • Evalue 0.0
rnr; ribonuclease R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 787.0
  • Bit_score: 1284
  • Evalue 0.0
  • rbh
Ribonuclease R n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA34_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 782.0
  • Bit_score: 1431
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
ATGAAAAAGAAGCATGGCGCGACCGATGGCTTTCCCGACAAGGCGAGCATCGTCGCGTTCATCAAGATCAACCCTCGCGAGGCCGGCACGCGCGAACTGGCGCGGCATTTCGGCCTCAAGAACGAATCCCGCGCAGCATTGCGTCGGATCCTGCGTGAACTCACGGACGAAGGGGTAATCGCCAAGCAGAGCAAGCGCGTACATGACGCGCGCGATCTGCCACCAATCCTTGTCGCCGACGTAACCAAAACCGACAGTGACGGCGACCTTATCGCTGTGCCGGCCGAATGGGCCGAGGACATCGACGGCCCCGCGCCGGTCATCCACATCCACACGCCGCGCCGGCCGAAGCCCGGCACCGTGGCGGGCGTCGGCGAGCGGGTACTGCTGCGGCTGGAAAAGCGCGTGCGCGGCGAACGCACAGCCCTCTATGTCGGCCGCGTCATCAAGGTGCTGGAAAAAACCAGAAACCGCGTGCTCGGCGTCTTCCGCGCCCAACCACAGGGCGGCGGCCGAATGATCCCTGTCGACAAGAAACAGGCCGGACGCGAACTCAATATCTCTGCTGTCGACAGCGCTGACGCGCAGGATGGTGATCTCGTCAGCGTCGAGTTGATCCGCTCGCGCGGCTACGGCCTGCCCGCCGGGCGCGTACGCGAACGGCTCGGCTCGATAAAAACCGAGAAAGCCATCAGCCTGATCGCCATTCACGCCCACGAGATTCCGCAGGAATTTTCACGCGCGGCCATCGGCGAGGCGGAAGCCGCCAAGGTCGCGCCCCTGAAGGGGCGCGAAGATTGGCGCGACGTGCCGCTCATCACTATCGACCCACCCGACGCCAAGGACCACGACGACGCGGTGCATGCCACGCCCGATATCGATCCTGCCAACAAGGGCGGCTTTATCGTCAACGTGGCGATCGCAGATGTTGCCTACTACGTGCGGCCGGATTCCGCGCTCGATCGTGAAGCGCTCAAGCGCGGCAACTCGGTCTATTTCCCCGACCGCGTGGTGCCGATGCTGCCCGAGCGTATCTCCAACGACCTGTGCTCGCTGAAACCACACGAGCCGCGTGGAGCCATCGCGGTACGCATGGTGATCGGCGCGGACGGAGCCAAGCGCTCGCACAGTTTCCACCGCATCCTGATGCGCTCAGCTGCGAAATTGTCCTACGCGCAGGCACAGGCCGCGCGCGACGGACGCCCCGACGACGCCACTGGCCCTCTGATAGAGTCCATCCTCGCGCCGCTCTACACGGCGTATGCGCTGGTGAAGCGCGCGCGAGACAAGCGTGATCCCCTTGAACTGGAGCTGCCCGAGCGCAAGATCCTCTTGAAACCGGACGGCACGGTGGATCGCGTCACCACGCCAGAGCGGCTCGACGCACACCGGCTGATCGAGGAATTCATGATCCTCGCCAATGTCGCCGCCGCCGAGACGCTCGAGAAGAAGGCGCTGCCGCTGATCTATCGCGTGCATGACCAGCCGACGCAGGAGAAGGTTCACAACCTTCACGAGTTCCTCAAGACGCTCGACATGCCGTTCACCAAATCTGGCGCGCTCCGGCCTTCCGTATTCAACCGCATCCTTGCGCAGGTAAAGGGTCGCGACACTGAATCACTCGTCAACGAGGTCGTGCTGCGCTCGCAAGCGCAGGCCGAATACGCCTCGGAGAATTACGGGCATTTTGGCCTCAATTTGCGGCGCTATGCTCATTTCACCTCGCCGATCAGGCGATATGCCGACCTGATCGTGCACCGCGCCTTGATCCGTGCACTTGGTCTTGGCGATGGGGCCCTGCCCGAACACGAAACATTGGAAACCCTGGGTGAAGTCGCTGCCGCTATCTCGCTTACCGAACGGCGCGCCATGAAGGCCGAACGCGAAACCACCGATCGCCTGATCGCACATTTTCTGGCTGATCGCGTCGGTGCCATCTTCGAAGGCCGGATTTCCGGCGTCACCAAGGCGGGCCTGTTCGTGAAATTGAATGAGACTGGTGCCGACGGTCTGATTCCGGTGCGCTCGCTCGGCAGCGAATTTTACCATTTCGATAAAACCCGGCATGCGCTGATCGGAACGCGCAGTGGTGCCATGCACAGGCTAGGTGACGTCGTGGAGGTTCGTCTGGTAGAAGCAGCGCCTGTCGCCGGCGCGCTTCGGTTCGAACTCCTTTCCGAGGGAGCGAAGGCACCGCGCGAAAAACGCGAATTCGGCAGCCGGAAACACGCCGGCCGGAAATATGGCGCGAAGGGAAAGACAGAGAGAGGTCCGAAGGGCAAGGCGCGCAAGAACAAACCCAAAGGCAAGCTCCAGACCAAATCCGGCAAAGGCAAACGAGACAGATGA
PROTEIN sequence
Length: 783
MKKKHGATDGFPDKASIVAFIKINPREAGTRELARHFGLKNESRAALRRILRELTDEGVIAKQSKRVHDARDLPPILVADVTKTDSDGDLIAVPAEWAEDIDGPAPVIHIHTPRRPKPGTVAGVGERVLLRLEKRVRGERTALYVGRVIKVLEKTRNRVLGVFRAQPQGGGRMIPVDKKQAGRELNISAVDSADAQDGDLVSVELIRSRGYGLPAGRVRERLGSIKTEKAISLIAIHAHEIPQEFSRAAIGEAEAAKVAPLKGREDWRDVPLITIDPPDAKDHDDAVHATPDIDPANKGGFIVNVAIADVAYYVRPDSALDREALKRGNSVYFPDRVVPMLPERISNDLCSLKPHEPRGAIAVRMVIGADGAKRSHSFHRILMRSAAKLSYAQAQAARDGRPDDATGPLIESILAPLYTAYALVKRARDKRDPLELELPERKILLKPDGTVDRVTTPERLDAHRLIEEFMILANVAAAETLEKKALPLIYRVHDQPTQEKVHNLHEFLKTLDMPFTKSGALRPSVFNRILAQVKGRDTESLVNEVVLRSQAQAEYASENYGHFGLNLRRYAHFTSPIRRYADLIVHRALIRALGLGDGALPEHETLETLGEVAAAISLTERRAMKAERETTDRLIAHFLADRVGAIFEGRISGVTKAGLFVKLNETGADGLIPVRSLGSEFYHFDKTRHALIGTRSGAMHRLGDVVEVRLVEAAPVAGALRFELLSEGAKAPREKREFGSRKHAGRKYGAKGKTERGPKGKARKNKPKGKLQTKSGKGKRDR*