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SCNpilot_solid_2_scaffold_47_40

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 39536..40930

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA03_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 473.0
  • Bit_score: 744
  • Evalue 7.20e-212
  • rbh
Porin omp2b {ECO:0000313|EMBL:CEG07763.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacill similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 484.0
  • Bit_score: 776
  • Evalue 2.40e-221
porin similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 486.0
  • Bit_score: 697
  • Evalue 3.20e-198
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAGCAAGATTAAGAGCCTTGTCCTCGGATCGGCAGCGGCAATCGTTGCGATCGGTGGCGCACAGGCGGCTGATCTTCCCGTCAAGGCCAAAGCGGTCGAGTACGTGAAGGTTTGTTCCCTGTACGGCGCTGGTTTCTACTACATCCCGGGCACCGACACCTGCATCCGCATCGGCGGCTATGTGCGTGCGGAAGTCACCTTCAACGGCGCTCCTTCGGACGCGACCTACATCAGCGGCAATGGCGGCCTCGGCCTCCGCACCGCTGGTGAATACCAGTCGCGCGCCCGCATCATGATGAAAGTCGACACCCGCACCGCGACCGAATACGGTGTTGTCCGTACCTTCGGCGCGTTCGGCCCACAGTTCACCACGGGTGCTGACAATACCAACACCGACCCGCAGGCTGGCGGTGGTATGCGTGTTGAAGCTGCGTTCATCCAGTTCGCCGGCTTCACCTTCGGCCGGTCGGCTTCGGCTTACGCCCTGCCGTGGAACGGCGCCCCAGGCAACATCAACTCGACCCTCATGGGCGGCCCGAACTACGACGCCGGCGTGAACAACATCCAGTACACCTGGCAGTTCGGCAACGGCGTATCGGCCAGCGTTGGTATCGACCAGCAGGAGCATGCCAACCGCATTGGCGTTCTGAACGGTCTTCCGCTGTCCGTGAACGGCAACTATGGGGATGCCTATGCTGCTCCGACTGCTCCGGACGTCGTCGGTAACCTCCGCCTCGACCAGGCCTGGGGTCTGATCCAGTTCTCGGCGGCTGCTCACGAAGTCACCGGCAACTACTACACGGCTATCCCGTGGCAAGGCCACCCGAGCGACAAGTGGGGCTTCGCTGTGACCGGTGCGTTGCAGCTCAAGAACCTGCCGACCGGACCCGGCGACGACATCAAGATCAGCGGTACCTACACCGAGGGTGCGCTGCGCTACGTGCTCGGCCAGTCGGGTGCGACCCCGACCAACTTCCAGGTCCTGAACGGCGGCACCTTCGCCGGCGTTACGATTGCGGATGGTGTCTATGGTCTGGGTACTGGCCTCGAACTGACAAAGGCCTATGGTTTCAACGGTGCCTTCAACCACAACTGGAACCGTTACTGGTCGTCCAGCGTGTTCGGTTCGTACTCGCACGTTGACTACAATGGTGCTGTGACGACTGCCTTCGGCTACAATCCTGACTTCAACATCAGCCAGTTGGGCGTGAGCACCACCTGGAAGCCGGTCAAGAACCTCGCCTTCATCGTTGAAGGCAGCTGGGTCCACATCGACCAGAGCCGTGCCGGTCTCACCGGCTCAGCGACTCTGAACAATATCGCGGCCCGTCCGACCTTCTTCGGCGATACCGACTCCTATTCGGGTATCTTCCGCGCTCAGCGCAACTTCTGA
PROTEIN sequence
Length: 465
MSKIKSLVLGSAAAIVAIGGAQAADLPVKAKAVEYVKVCSLYGAGFYYIPGTDTCIRIGGYVRAEVTFNGAPSDATYISGNGGLGLRTAGEYQSRARIMMKVDTRTATEYGVVRTFGAFGPQFTTGADNTNTDPQAGGGMRVEAAFIQFAGFTFGRSASAYALPWNGAPGNINSTLMGGPNYDAGVNNIQYTWQFGNGVSASVGIDQQEHANRIGVLNGLPLSVNGNYGDAYAAPTAPDVVGNLRLDQAWGLIQFSAAAHEVTGNYYTAIPWQGHPSDKWGFAVTGALQLKNLPTGPGDDIKISGTYTEGALRYVLGQSGATPTNFQVLNGGTFAGVTIADGVYGLGTGLELTKAYGFNGAFNHNWNRYWSSSVFGSYSHVDYNGAVTTAFGYNPDFNISQLGVSTTWKPVKNLAFIVEGSWVHIDQSRAGLTGSATLNNIAARPTFFGDTDSYSGIFRAQRNF*