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SCNpilot_solid_2_scaffold_47_45

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 46486..46902

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MSCL_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 136.0
  • Bit_score: 227
  • Evalue 1.20e-56
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 136.0
  • Bit_score: 227
  • Evalue 3.60e-57
Large-conductance mechanosensitive channel {ECO:0000255|HAMAP-Rule:MF_00115}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 136.0
  • Bit_score: 227
  • Evalue 1.60e-56

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCTCAAGGAATTCCGCGACTTCGCCATGAAGGGCAATGTCGTCGATTTGGCCGTTGCCGTGATTATCGGCGCGGCGTTCGGCGCCGTCGTCAGTTCGATGGTCGCTGACATCATCATGCCGATCATCGGCGCGATTACCGGCGGCCTCGACTTCTCGAACTACTTTACCGGCCTCTCCGAAGCAGTAACGGCAACCAACCTGGTCGATGCGAAAAAGCAGGGCGCCGTGTTGGCTTGGGGCAATTTCCTGACGCTGGCGTTGAACTTCATTATTATTGCGTTCGTTTTGTTCATGATCATTCAACTCATGAACAGATTGAAGCGTAAGCAGGAAGCTGCCCCGCCTCCGCCGCCGAAGCCTTCCGCGGAAGTTGAATTGCTGACCGAGATTCGCGATCTGCTGAAAAAGACCTGA
PROTEIN sequence
Length: 139
MLKEFRDFAMKGNVVDLAVAVIIGAAFGAVVSSMVADIIMPIIGAITGGLDFSNYFTGLSEAVTATNLVDAKKQGAVLAWGNFLTLALNFIIIAFVLFMIIQLMNRLKRKQEAAPPPPPKPSAEVELLTEIRDLLKKT*