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SCNpilot_solid_2_scaffold_47_75

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 71306..72607

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 433.0
  • Bit_score: 830
  • Evalue 1.00e-237
glyA; serine hydroxymethyltransferase GlyA (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 433.0
  • Bit_score: 798
  • Evalue 9.50e-229
  • rbh
Serine hydroxymethyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9X3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 433.0
  • Bit_score: 830
  • Evalue 7.20e-238
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGTCGTCTTCCGCGAAAACCGCTTCCGCTCCGAACACGTTCTTCACCGCCACGCTGGGGGAGGCCGATTCTGAGATCGCCGATGCAATCAAAGGCGAGCTGGGCCGCCAGCAGCATGAGATCGAGTTGATCGCGTCCGAAAATATCGTCAGCCGCGCCGTGCTCGAGGCGCAGGGTTCGGTGCTCACCAACAAGTACGCAGAAGGTTATCCGGGCAAGCGCTATTATGGCGGCTGCGAATGGGTCGACGTGGTGGAAACGCTGGCGATCGAGCGCGCCAAGAAGCTGTTCGGCGCGAACTTCGCCAACGTCCAGCCGAACTCTGGCAGCCAGATGAACCAGGCGGTGTTCCTGGCGCTCTTGCAGCCGGGCGACACCTTCATGGGCCTCGACCTTGCGGCGGGCGGCCATCTCACCCATGGTGCGCGGGTCAACATGTCCGGTAAATGGTTCACGCCGAAACACTACACGGTACGACGCGAGGACTATCTCATCGACATGGATGCGGTGGCCAGGCAGGCACAGGAAGTGAAGCCGAAGCTGATCATTGCGGGTGGCTCGGCTTATTCGCGGCCGTGGGACTTCAAGCGTTTTCGCGAGATTGCCGACAGCGTCGGCGCCTATCTCATGGTGGACATGGCGCACTTTGCCGGTCTGGTCGCGGGCGGGGTTCATGCCTCGCCGGTGCCGTACGCGCACGTCACCACCACGACCACCCACAAGTCGCTGCGCGGCCCGCGCGGCGGCCTGATCCTCACCAATGACGAGGAAATCGCCAAGAAGATCAACTCGGCGATTTTCCCCGGCCTGCAGGGCGGTCCGCTGATGCATGTCATTGCCGCCAAGGCGGTGGCGTTCAAGGAAGCCTTGCAACCGGACTTCAAGGTCTACGCGAAGAACGTCGTCGAAAACGCCAAGGCGCTTGCGGAATCGCTGCGCGGTCATGGCTTCGAGATCGTCTCCGGCGGCACTGACAACCACCTGATGCTGGTCGACCTTCGTCCGAAGGGTTTGAAGGGCAACATCTCGGAGCGGGCTCTGGTGCGCTCGGGCCTGACCTGCAACAAGAACGGCATCCCGTTCGATCCCGAAAAGCCGTTCGTGACGTCGGGTCTGCGTCTCGGCACGCCGGCGACCACCACTCGCGGTTTTGGCATCGCCGAGTTCAAGCAAGTGGCCTCGCTGATCGCTGAAGTGCTCAACGCCGTGGCACAGTCGCCGGATGGGGCTGCGCCGGGCGTCGAGGAATCGGTGAAGAAACGGGTGCGTGAACTGACCGACTGTTTCCCGATTTATTCGTAA
PROTEIN sequence
Length: 434
MSSSAKTASAPNTFFTATLGEADSEIADAIKGELGRQQHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPGKRYYGGCEWVDVVETLAIERAKKLFGANFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHGARVNMSGKWFTPKHYTVRREDYLIDMDAVARQAQEVKPKLIIAGGSAYSRPWDFKRFREIADSVGAYLMVDMAHFAGLVAGGVHASPVPYAHVTTTTTHKSLRGPRGGLILTNDEEIAKKINSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKNVVENAKALAESLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRSGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGIAEFKQVASLIAEVLNAVAQSPDGAAPGVEESVKKRVRELTDCFPIYS*