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SCNpilot_solid_2_scaffold_47_89

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 83832..84176

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9V9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 114.0
  • Bit_score: 215
  • Evalue 2.90e-53
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1035 species="Bacteria; Proteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 114.0
  • Bit_score: 215
  • Evalue 4.00e-53
integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 114.0
  • Bit_score: 204
  • Evalue 1.60e-50

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGAGCGAGAGCGGAAAAACAGTCACGCGGGTCGATTTGTGCGAGGCGGTCTACCAGAAGGTCGGCCTGTCGCGAACGGAGTCGGCTGCGTTTGTCGAACTCGTGCTCAAGGAGATCACCGACTGCCTCGAGAAGGGCGAAACGGTGAAGCTGTCATCGTTCGGCTCCTTCATGGTGCGCAAAAAGGGTGAGCGGATCGGCCGCAATCCCAAGACCGGGACGGAGGTTCCGATCTCTCCGCGGCGCGTCATGGTGTTCAAGCCGTCGGCGATTCTGAAGCAGCGCATCAATAACGGTGTCGCCACCAAGGATGAAGCGGCGGTCGCCAGCGCAGCTGTGGGCTAG
PROTEIN sequence
Length: 115
MSESGKTVTRVDLCEAVYQKVGLSRTESAAFVELVLKEITDCLEKGETVKLSSFGSFMVRKKGERIGRNPKTGTEVPISPRRVMVFKPSAILKQRINNGVATKDEAAVASAAVG*