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SCNpilot_solid_2_scaffold_137_153

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 172397..173221

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3T9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 274.0
  • Bit_score: 482
  • Evalue 4.00e-133
  • rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EFI52619.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 274.0
  • Bit_score: 482
  • Evalue 5.50e-133
cpaB; Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 274.0
  • Bit_score: 445
  • Evalue 1.30e-122
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAACACCGCGCGTCTTGTGGTGCTAGCCATTGCCGTCAGTGCCGGCGGCGTTGCAGCCTTCCTCGCCAGTGGATCGGATCAGAAGCCGACACCTCATGTCGCTGCTCCGGCACCGCAACTGGAAACCACGGATGTGCTGGTGGCGAAGAACGATATCCCGCTTGGCCAGACCATGACTGCGGACGACATGAAGTGGCAGTCCTGGCCTGCCGCGACGGCCAGTTCGAGCTTTATCAAGAAAAATGAACGTGCCGACGCCATCAAGGATATGACGGGTTCGATCGTGCGTTCGCCCTTTCTTGCCGGCGAGCCGATCCGCGAAACCAAGCTTGTAAAAGCCAATGGCTCGGGCTTCATGGCAGCCATCCTGCCGAGCGGCATGCGCGCAGTTTCGACAGAGATCTCGCCGGAAACCGGCGCCGGTGGCTTTATCCTGCCTAACGATCGCGTCGATGTGCTGTTGTCCCGCCGCCAGAGGAGCCAGGAGGGCAATGGTGGCGAAAGCGCCAGCTCGGAGATCATTCTCAGCGATGTCCGGGTTCTCGCCATCGACCAGACGGTCGAGGAAAAGAACGGCCAGAAAGTGGTTGTTGGCAAAACCGCGACGCTGGAGTTGAAGCCGAAACAGGCGGAGACATTGGCGCGCTCCCGGCAAAGCGGAACGCTGTCACTTGCCCTGCGCAGCCTTGTCGATGCCAATAAGGCTGTCAAGGTCGAGGACGCAGGCGATGAGAAGCTGATTACGGTCTATCGCGGCGTTAGTGAGCGTGAGACCTACAATTGCTCGGCATCGTGCAAGAAGCGCGGCAGCGAGGGCGGCTAG
PROTEIN sequence
Length: 275
MNTARLVVLAIAVSAGGVAAFLASGSDQKPTPHVAAPAPQLETTDVLVAKNDIPLGQTMTADDMKWQSWPAATASSSFIKKNERADAIKDMTGSIVRSPFLAGEPIRETKLVKANGSGFMAAILPSGMRAVSTEISPETGAGGFILPNDRVDVLLSRRQRSQEGNGGESASSEIILSDVRVLAIDQTVEEKNGQKVVVGKTATLELKPKQAETLARSRQSGTLSLALRSLVDANKAVKVEDAGDEKLITVYRGVSERETYNCSASCKKRGSEGG*