ggKbase home page

SCNpilot_solid_2_scaffold_204_12

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 9503..10354

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9E1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 248.0
  • Bit_score: 472
  • Evalue 3.20e-130
  • rbh
HTH-type transcriptional repressor YvoA {ECO:0000313|EMBL:CEG08815.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 248.0
  • Bit_score: 472
  • Evalue 4.50e-130
putative UbiC transcription regulator-associated similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 236.0
  • Bit_score: 199
  • Evalue 1.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
GTGATTTGGTTGTGCGTAGCCGCTCGACTGAGCGGGAAGGACTTCGGTCCGAAGACGGCTTCTGTTACTTATCGGCTTGAATCGTTTGAAACGGCGAAGGAACTGGTGAGCAACGAAACGACAGTGTCAGGCGGTCATACCGAATATCTTCCCCTGTACGCGCAGGTGAAGACGCTTCTTGTCAAGCGTATCGGTGCCGGAAGCTGGAAGCCAGGTCAGATGCTTCCGAGCGAGTATGAACTCGCCGCCGAATACAATGTCAGCCAGGGTACCGTGCGCAAGGCGCTCAATGCGCTGGAAGCCGATCGCATGATCGTGCGGCGGCAGGGCGTTGGCACGTTCGTCGCGCGGCATTCCCGCGACCGTGCACTGTACCAATTCTTCCGCATCGTCGAGCCGGATGGCAGCCGCATCATTCCCACAAGCGTGGTGTTGTCGCAGCGTATCCAGCGTGCGACGCGCGATCAGGCAAGCGATCTGGGCGTCGATTCATCGGCCATGCTTCACGCGATTACCCGGGTGCGCAGCCTTGACGGCAAGCCCGCGATCTTCGAGCGGATCTACGTGCCGGTGGATGTGATGCCCGATCTCTCCGTCGAGGCGCATACCCAGATGGATGAAGAAATGTATGTCATCTATCAGGAGAGATTCGGCATCAGCATCGTGCGCGTCATCGAGCGGCTGGCGGCTGTCGCCGCGACCGCGGAAGAAGCAAAGAGGCTGGGCCTGAAAGCGGGAACGCCGTTGCTGGAAGTTCATCGCGTCGCGACCGATGTTGGCGGCCAGCCGGTGGAATTGCGGATCAGCCGCTGCGACACCCGCCGCTGTCGTTACGCCGCGGAAGTGCTTTAG
PROTEIN sequence
Length: 284
VIWLCVAARLSGKDFGPKTASVTYRLESFETAKELVSNETTVSGGHTEYLPLYAQVKTLLVKRIGAGSWKPGQMLPSEYELAAEYNVSQGTVRKALNALEADRMIVRRQGVGTFVARHSRDRALYQFFRIVEPDGSRIIPTSVVLSQRIQRATRDQASDLGVDSSAMLHAITRVRSLDGKPAIFERIYVPVDVMPDLSVEAHTQMDEEMYVIYQERFGISIVRVIERLAAVAATAEEAKRLGLKAGTPLLEVHRVATDVGGQPVELRISRCDTRRCRYAAEVL*