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SCNpilot_solid_2_scaffold_204_15

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 14150..15217

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9E4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 355.0
  • Bit_score: 652
  • Evalue 2.20e-184
  • rbh
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EFI50782.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 355.0
  • Bit_score: 651
  • Evalue 8.90e-184
signal transduction histidine kinase with PAS/PAC sensor domain similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 352.0
  • Bit_score: 438
  • Evalue 1.60e-120
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
GTGCGTGACCTTGAGCAACAGCAGCAACGCGCGCTGCTCGACAACATCCCCGACCCGGCGTGGCTGAAGGATCGCGATTCCCGGTATCTTGCCGTCAATTCGGCTTATCTGGCGATCATCGGGCTGCGGGAAGACGAGGTGATCGGCAAGACGCCATACGATATATGGCCTTCCGATATTGCCGACATTTACATGCAGACCGACCGGGCCGTGGTGAAAAGCGGTCGGCGGCGGCGCTACGAGGAAACCCGCTCCGATCCGGACGGCCGGCTGTTATGGTTTGAGACCATCAAATCGCCGATCCGTGACGGTGAGGGGCACATCATCGGCACGGTCGGCATCTCGCGTGACATTTCCGAGCGGAAGGCCGCGGCCGATGAGCTGCTTCGCTCGCGCGCGCAGCTTCGCGAACTGTCCTCCTTCCTGCAATCGGTGCGAGAGGAGGAGCAAGCCAGGATTTCGCGAGAGTTGCACGATGAATTGGGCCAGACCCTGACCGCGCTGAAGATCGAACTGATCTGGCTGCATGAGCGGCTTGCATCGCAGGATATGCTTCAGTCACGCGTCGACCGGCTGGTGTCGATCGTGGATCGTTCGGTGACCGACCTGCGCCGCATCGCGGTCAATTTGCGACCGATGATTCTGGACGAACTTGGCCTGGTCGCAGCGATGAAATGGCTCACCCAGAATTCCGCCGAGCTTGGTGGTCTCGATATCTCGCTGTCGTTCGACAAGGAAAATATCAGCTACGACAGCGCGGTTTCGACGGCCGTGTTCCGTATTGTGCAGGAGGCGCTGACCAACGTGATGCGCCATGGCGAAGCGAAGCGCGCGAGCGTCGTTGTTTCCCATGAAGGGAAAGAGTTGCATGTCGAGATCACCGACAATGGATGCGGGATCGATCGGGGTGCCTCTCAACTCAACAAGCTTGGGCTTGTCGGCATGCGCGAGCGGGCCCGCGCGCTTGGCGGGTCTGTCGCCATCAGCGACAACCCACAGGGCGGCACGATTGTCTCCGTCCGTTTGCCATTGAATGATCCGATCTTACAGGACAAACTGCCGTCATGA
PROTEIN sequence
Length: 356
VRDLEQQQQRALLDNIPDPAWLKDRDSRYLAVNSAYLAIIGLREDEVIGKTPYDIWPSDIADIYMQTDRAVVKSGRRRRYEETRSDPDGRLLWFETIKSPIRDGEGHIIGTVGISRDISERKAAADELLRSRAQLRELSSFLQSVREEEQARISRELHDELGQTLTALKIELIWLHERLASQDMLQSRVDRLVSIVDRSVTDLRRIAVNLRPMILDELGLVAAMKWLTQNSAELGGLDISLSFDKENISYDSAVSTAVFRIVQEALTNVMRHGEAKRASVVVSHEGKELHVEITDNGCGIDRGASQLNKLGLVGMRERARALGGSVAISDNPQGGTIVSVRLPLNDPILQDKLPS*