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SCNpilot_solid_2_scaffold_228_14

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 14078..14650

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6G8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 190.0
  • Bit_score: 356
  • Evalue 1.30e-95
  • rbh
Polysaccharide export protein {ECO:0000313|EMBL:EFI51915.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 190.0
  • Bit_score: 356
  • Evalue 1.90e-95
putative polysaccharide biosynthesis/export; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 190.0
  • Bit_score: 331
  • Evalue 1.40e-88
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAAGTTCCGCATTTCCTTGCCGCGAATGTCGTTGTTCATTTTCGCGGCATTTTCCTTTTCTCTTTTTACATTGAATGCTCACGCGCGGGCGGAAACATCCTTCTCGCCTTCCGGTCCTTACCTTCTTGGCCCCAACGATAAAGTCCGGGTCAAGGTGTATGGCGAGCCTGACATCACCGGCGAATATGAGGTCGATAGCAACGGCAGCGTGTCGATTCCGTTGGCAGGGCGTGTTCAAGCTGTCGGCAAGACCACCAAACAACTTGAAGGTGCTATTCGTGCGGCTCTTGCGAAAGGCATCGTGCGCGAGCCTCGTGTCAATGTCGATGTTGCGACCTATCGTCCCTACTACATCTTGGGCGAAGTGAAGAACAGCGGTGAATATCCCTACAAGGTAGGCCTCACCATCATGGACGCTGTTGCAGCTGCAGGTGGATTCACCTATCGCGCCAACGAGCACAAAGTATATTTGCGCCGCGCGGGCGTCGGTAGAGAGGAAGAATATACGCTTGACGCGCCTGTCCTTGTTTATCCTGGCGACAACATTCGTATCCCGGAGCGATATTTCTAG
PROTEIN sequence
Length: 191
MKFRISLPRMSLFIFAAFSFSLFTLNAHARAETSFSPSGPYLLGPNDKVRVKVYGEPDITGEYEVDSNGSVSIPLAGRVQAVGKTTKQLEGAIRAALAKGIVREPRVNVDVATYRPYYILGEVKNSGEYPYKVGLTIMDAVAAAGGFTYRANEHKVYLRRAGVGREEEYTLDAPVLVYPGDNIRIPERYF*