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SCNpilot_solid_2_scaffold_502_67

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 64677..64952

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion exporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAA8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 166
  • Evalue 9.40e-39
hypothetical protein; K04061 flagellar biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 91.0
  • Bit_score: 166
  • Evalue 5.10e-39
Type III secretion exporter {ECO:0000313|EMBL:EFI50402.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 166
  • Evalue 1.30e-38

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGACGACGATAACGACCCCGATCCAGAACACACTTGCCGTTGCGCTGCATTACGATCGCAAGGGGGCGCCACGCGTCGTCGCCAAGGGCAAGGGCGAGATCGCGAAGAAGATCATTGAGGTTGCCGGCGAACATGATGTCGCCATCCAGGAGAACGAGGTGCTTGCGGGGGCACTCTCCAATGTTGAGATCGGCGATGAGATTCCGGCCGAATTGTATAAGGCGGTGGCGGAGGTCCTGATCTTCGTCATGCGATTGTCGGGTAAAATCCGCTGA
PROTEIN sequence
Length: 92
MTTITTPIQNTLAVALHYDRKGAPRVVAKGKGEIAKKIIEVAGEHDVAIQENEVLAGALSNVEIGDEIPAELYKAVAEVLIFVMRLSGKIR*