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SCNpilot_solid_2_scaffold_882_14

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 15748..17019

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6D2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 423.0
  • Bit_score: 744
  • Evalue 6.60e-212
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51879.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 423.0
  • Bit_score: 744
  • Evalue 9.20e-212
multidrug resistance protein MdtA; K07799 putative multidrug efflux transporter MdtA similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 418.0
  • Bit_score: 691
  • Evalue 2.10e-196
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGCTCTTTAAGCCACGCGAGGATGGCAGGGTGAACGAGGGCGCCACAAGGATCACTGCCGGTGCGCGGCGGCGCACGGTGTTGCTGCTCATCAGTCTGGCGATCGTCGCGGCACTCGGCTGGTTTGCGTGGTCACATTTCTACGGCGGGCAGGGCGCGTCCCGCGCGCGGCCCGACATGGCGGTTCCGGTGCTGGCGGCGACACCCAAGGTCGAGGATGTGCCAGTCTATCTCGACGGCGTCGGAATGGTGCGGGCACTTAACACGGTTACCGTGCGGACGCAGGTAGACGGCAAGCTTTTGAAGGTTAATTTTGTCGAAGGGCAGGACGTCAAGGCGGGCGACGTGCTCGCTGAGATCGACCCTGTGCTCTATCAGGCACAGTATGATCAGGCCGTCGCCAAAAAGGCGCAGGACGAAGCGCAGCTTGGAAATGCGCGGCTTGACCTGAAGCGCTACGAGCAGCTCGCAGCCTCGAAGGCGGGTTCTGCACAACAGGCCGATACTCAGAAATCAACCGTTGCTCAACTCGAGGCACTGGTGCAGTCCGATCAGGCCGCCATCGACAATGCAAAAGCGACTCTCGGCTATACCAAAATCATCGCACCGTTGGCCGGCCGCACTGGTTTGCGTCAGGTCGATCCCGGCAACATCGTCCATGCCTCCGACACTACGGGTATCGTGATCCTGACGCAGTTGCAGCCCATCGCGGTGCAGTTCAGCTTGCCGCAGCAGGAGATCAACCGCGTCAACGCGGCGTCAGCAAAGGCCACGCTCGCCGTCGATGTGTTCGGCAATGACGGACGAACCGTCGTTGATACCGGCGTAATGCGCACGATCGATAATCAGGTCGATCCGACCACCGGCACGGTTAAGGTGAAAGCAGAATTCCCCAATCCGAACCACCAGCTATGGCCGGGGCAGTTTGTCAACGTCCGCCTCAAGGTCAAAGTCCTGCCGCAGGCGCTGACGGTGCCAACATCTGCCGTGCAGCGTGGCCCGTCGGGCACGTTCAGCTACGTGATCGGCGAGAATAATATCGTGACTGCCAAGGCTGTCACCGTGACACAGCAGGACGAAAACACGGCCGTCATCGTCAATGGTCTGACACCGAACGACAAAGTGGTCACGACGGGTTTCGCCAACCTTTCCGACGGTTCGAAGGTGGTGATCGGCACCAGCGACAACACACCGACGCAGGATCTTGCGCCGCGCAAACGTGAGCAAAAGGGCGGGCAGGGCGGGCAGGGCGGCGGACGGCGTTCGCGATAA
PROTEIN sequence
Length: 424
MLFKPREDGRVNEGATRITAGARRRTVLLLISLAIVAALGWFAWSHFYGGQGASRARPDMAVPVLAATPKVEDVPVYLDGVGMVRALNTVTVRTQVDGKLLKVNFVEGQDVKAGDVLAEIDPVLYQAQYDQAVAKKAQDEAQLGNARLDLKRYEQLAASKAGSAQQADTQKSTVAQLEALVQSDQAAIDNAKATLGYTKIIAPLAGRTGLRQVDPGNIVHASDTTGIVILTQLQPIAVQFSLPQQEINRVNAASAKATLAVDVFGNDGRTVVDTGVMRTIDNQVDPTTGTVKVKAEFPNPNHQLWPGQFVNVRLKVKVLPQALTVPTSAVQRGPSGTFSYVIGENNIVTAKAVTVTQQDENTAVIVNGLTPNDKVVTTGFANLSDGSKVVIGTSDNTPTQDLAPRKREQKGGQGGQGGGRRSR*