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SCNpilot_cont_1000_p_scaffold_157

Search features with annotation key words

Displaying items 31-60 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_157_31
unknown

Not on your lists

comp(29805..30053)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_157_32
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30191..31093
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000360BCF5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGE85727.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_157_33
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31258..31818
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361CF4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63702.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_157_34
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


31831..32037
DNA (207bp) protein (69aa)
50S ribosomal protein L32 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGZ3_NIAKG
50S ribosomal protein L32P; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_157_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32056..33012
DNA (957bp) protein (319aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;
Phosphate acyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIE2_CHIPD
SCNpilot_cont_1000_p_scaffold_157_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33078..33719
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHQ8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59994.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_157_37
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33759..34250
DNA (492bp) protein (164aa)
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JTS7_9BACT
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ELR72396.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SCNpilot_cont_1000_p_scaffold_157_38
unknown

Not on your lists

comp(34247..35029)
DNA (783bp) protein (261aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_157_39
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35681..36613
DNA (933bp) protein (311aa)
Mammalian cell entry related domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3D6_9SPHI
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EHQ29291.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
virulence factor Mce family protein
SCNpilot_cont_1000_p_scaffold_157_40
unknown

Not on your lists

comp(36621..37247)
DNA (627bp) protein (209aa)
hypothetical protein id=1729328 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
SCNpilot_cont_1000_p_scaffold_157_41
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

37255..38370
DNA (1116bp) protein (372aa)
tRNA-dihydrouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ5_NIAKG
tRNA-U20-dihydrouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_157_42
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38343..38768)
DNA (426bp) protein (142aa)
DoxX-like family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3V1W6_9LEPT
DoxX-like family protein {ECO:0000313|EMBL:GAL84494.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_157_43
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38851..39186
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P06_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG60857.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_cont_1000_p_scaffold_157_44
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39232..39726
DNA (495bp) protein (165aa)
Phosphodiesterase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MZ61_9SPHI
metallophosphoesterase; K07095
Metallophosphoesterase {ECO:0000313|EMBL:AEW00736.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_157_45
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

39749..40183
DNA (435bp) protein (145aa)
Peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF3_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_157_46
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40192..41184
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037B24DE
Putative CDF family transporter {ECO:0000313|EMBL:GAO41542.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cation diffusion facilitator family transporter
SCNpilot_cont_1000_p_scaffold_157_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41179..41652)
DNA (474bp) protein (158aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Ribonuclease H n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAB3_CHIPD
SCNpilot_cont_1000_p_scaffold_157_48
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41773..42513
DNA (741bp) protein (247aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003680FCD
hypothetical protein; K07081
SCNpilot_cont_1000_p_scaffold_157_49
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

42586..43443
DNA (858bp) protein (286aa)
hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMX5_CHIPD rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_157_50
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43458..44273
DNA (816bp) protein (272aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE1_CHIPD
SCNpilot_cont_1000_p_scaffold_157_51
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

44276..44956
DNA (681bp) protein (227aa)
Alanine racemase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PID3_CHIPD
alanine racemase; K06997
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_157_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44953..46197)
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH07_NIAKG rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEW00618.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_157_53
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46337..47695)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R751_OWEHD
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9b_curated
SCNpilot_cont_1000_p_scaffold_157_54
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47829..48446)
DNA (618bp) protein (206aa)
ABC transporter, ATP-binding protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GRT0_9SPHI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EOR94431.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
multidrug ABC transporter ATPase
SCNpilot_cont_1000_p_scaffold_157_55
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48467..49936)
DNA (1470bp) protein (490aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
UDP-3-0-acyl N-acetylglucosamine deacetylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ88_CHIPD
SCNpilot_cont_1000_p_scaffold_157_56
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49938..51008)
DNA (1071bp) protein (357aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG
SCNpilot_cont_1000_p_scaffold_157_57
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51078..52298)
DNA (1221bp) protein (407aa)
Metal dependent phosphohydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ90_CHIPD
metal dependent phosphohydrolase; K06885
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACU58779.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_157_58
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52324..54570)
DNA (2247bp) protein (749aa)
glycosyl transferase family protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Glycosyl transferase family 51 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMA8_CHIPD
Glycosyl transferase family 51 {ECO:0000313|EMBL:ACU64013.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_157_59
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55227..55973
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003733F6A
Uncharacterized protein {ECO:0000313|EMBL:EKN15376.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_157_60
unknown

Not on your lists

56012..56317
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 31-60 of 136 in total

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