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SCNpilot_cont_1000_p_scaffold_512

Search features with annotation key words

Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_512_31
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34302..35069
DNA (768bp) protein (256aa)
Alpha/beta hydrolase fold protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HQ86_9BACT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDE41834.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_p_scaffold_512_32
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35072..36643
DNA (1572bp) protein (524aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
Mur ligase middle domain-containing protein; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSA1_9BACT rbh
SCNpilot_cont_1000_p_scaffold_512_33
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36662..37843
DNA (1182bp) protein (394aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
D-alanine--D-alanine ligase (EC:6.3.2.4) rbh
D-alanine--D-alanine ligase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZ06_9BACT rbh
SCNpilot_cont_1000_p_scaffold_512_34
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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38036..41116
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF14_FLUTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA42479.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_512_35
unknown

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comp(41168..41314)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_512_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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41398..41670
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL12_CHIPD
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_512_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41741..44101
DNA (2361bp) protein (787aa)
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] rbh
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL11_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_512_38
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44173..45321)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373BD2B rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU63377.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_512_39
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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45402..46205
DNA (804bp) protein (268aa)
CHAD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90636.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
CHAD domain-containing protein
SCNpilot_cont_1000_p_scaffold_512_40
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46223..47974)
DNA (1752bp) protein (584aa)
FAD dependent oxidoreductase; K09835 prolycopene isomerase [EC:5.2.1.13] rbh
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003646684 rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KIC94890.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_p_scaffold_512_41
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48080..48682)
DNA (603bp) protein (201aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EAY28917.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EAY28917.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKV1_9BACT
SCNpilot_cont_1000_p_scaffold_512_42
unknown

Not on your lists

comp(48690..49229)
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_512_43
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49374..49571
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF3_CHIPD
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
SCNpilot_cont_1000_p_scaffold_512_44
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49653..50540
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E9_NIAKG
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Tyrosine recombinase xerC; K03733 integrase/recombinase XerC
SCNpilot_cont_1000_p_scaffold_512_45
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50570..50872
DNA (303bp) protein (101aa)
Putative sigma-54 modulation protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF5_CHIPD
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
Putative sigma-54 modulation protein {ECO:0000313|EMBL:ACU59195.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_512_46
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

51001..52119
DNA (1119bp) protein (373aa)
PQQ repeat protein n=2 Tax=Arthrospira platensis RepID=D5A6C9_ARTPN
PQQ repeat protein
PQQ repeat protein {ECO:0000313|EMBL:BAI93762.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
SCNpilot_cont_1000_p_scaffold_512_47
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

52259..53623
DNA (1365bp) protein (455aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ACU04857.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACU04857.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374FA47
SCNpilot_cont_1000_p_scaffold_512_48
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53762..55795)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037C081C
Uncharacterized protein {ECO:0000313|EMBL:KGE85476.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_512_49
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55885..56955)
DNA (1071bp) protein (357aa)
fatty-acid desaturase (EC:1.14.19.1); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] rbh
Fatty acid desaturase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCC1_9SPHI rbh
Fatty acid desaturase {ECO:0000313|EMBL:EHQ30112.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_512_50
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

57075..57563
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363D750
Uncharacterized protein {ECO:0000313|EMBL:AHM63402.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_512_51
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57566..58519)
DNA (954bp) protein (318aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000256|SAAS:SAAS00197180};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Segetibacter koreensis RepID=UPI0003826CEB
Displaying items 31-51 of 51 in total

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