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SCNpilot_cont_1000_p_scaffold_37_164

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 175122..176321

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Joostella marina DSM 19592 RepID=I3C6W0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 399.0
  • Bit_score: 525
  • Evalue 5.90e-146
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIJ39353.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 399.0
  • Bit_score: 525
  • Evalue 8.30e-146
HlyD family secretion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 400.0
  • Bit_score: 520
  • Evalue 3.50e-145
  • rbh

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Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAATTTATCATTTTATAAATCTACCCCGGTCATATTAACAGCGATTCTCCTTCTGGCGGCCTGCGGAAATAAAAAAACAGAGGAGAAAAGTACAGATGCAATAGAAGCCACTGCTTCAGCAGATACGACAACAGCTACATCAAAGCAGATCACTTTCACTACAGATCAATATCGGCTCGTCGGCATTGAAACCGGTAAGGTTGAAATGCGGAATCTGAGTAATATCATCAAGCTTAATGGAGTAATTGATGTAGAACCGAAGAGTACCGCCATCGTATCAGCACCATTGGGAGGTTATATCCGGACTGCCGGATTACTGCCCGGACAGGCTGTAAAGAAGGGCCAGGTTTTAGCCACTATTGAAAACCCTGAATTTATTACTATGCAGCAGGAGTACCTGGAAAGCAAAGGCCGCTTGCAATTTCTGGAACAGGAATACAACCGGCAGCAGAAATTGAGAGAAGAAGACGTAAATGCGGCCAAAACCTTTCAGCAAGTCGCCTCAGACTATAAAGTAATGCAGGCCCGCATTAGCGGTCTTGAACAGCAACTTGCTTTAGCCGGTATAAATAAGTCGGCGCTGCAGGCAGGAAAGATAACCCGGACAGCCAATCTGTATGCACCCATCAGCGGATATATTAAGACCAGCAATGTCACTATTGGCAAGTATGCTACTCCAACTGACGTCCTGTTCGAGATCATCAATAAAAACGATATCCATCTTGCCCTGAACGCCTATGAGAAAGATTTGCCAAAGCTTCAGGTAGGTCAGTCCGTCAAATTTTCGCTGGCTAATGAAAACAATTATGGTCGAACTGCAAAGGTGTTCCTAATCGGGCAAACGACGGGAGATGACCGGGTTGTGCCTGTTCACTGTCACTTAACGAATAGTGCTAATTCCAGCCTTCTTCCCGGAATGTACATAAAAGCCTGGATTGAAACAGGGGCTGAAAAGCAGTATGCCATTCCATCGGAAGCATTAGTCCAATTAGAAGGCAAAGACTATTTGATCTTTCAAACAGGGCAGTCTTCAAACGGATACACATTTCAACTGGAGCAGGTAAAAAAAGGCACCGAACAGGAAGGATATACTGCTGTAACCTTTCCTAAAGGTACAGACACTCAGAAAGTTGACGTGGTAGTAAAAAATGCCTATGCCATTATATCTGCCTTAAAGAATATGGAAGAATCGGAATAG
PROTEIN sequence
Length: 400
MNLSFYKSTPVILTAILLLAACGNKKTEEKSTDAIEATASADTTTATSKQITFTTDQYRLVGIETGKVEMRNLSNIIKLNGVIDVEPKSTAIVSAPLGGYIRTAGLLPGQAVKKGQVLATIENPEFITMQQEYLESKGRLQFLEQEYNRQQKLREEDVNAAKTFQQVASDYKVMQARISGLEQQLALAGINKSALQAGKITRTANLYAPISGYIKTSNVTIGKYATPTDVLFEIINKNDIHLALNAYEKDLPKLQVGQSVKFSLANENNYGRTAKVFLIGQTTGDDRVVPVHCHLTNSANSSLLPGMYIKAWIETGAEKQYAIPSEALVQLEGKDYLIFQTGQSSNGYTFQLEQVKKGTEQEGYTAVTFPKGTDTQKVDVVVKNAYAIISALKNMEESE*