ggKbase home page

SCNpilot_cont_1000_p_scaffold_37_110

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(116656..118647)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 663.0
  • Bit_score: 1172
  • Evalue 0.0
  • rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80778.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 660.0
  • Bit_score: 1178
  • Evalue 0.0
type IV secretory pathway VirD4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 663.0
  • Bit_score: 1172
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1992
ATGGCTGTACAGACAGGAGAAAACGAACAGGCGCTGAGGAAAATTCTGGACATGACCAGGTTGATCAGTATCGTTATTTTAGTGATACATTTCTATTATTATTGCTATGCAGCCTTTCAGGAATGGGGGTTGAACAGCGCTTTCAGCGACCGGATTTTAGGCAATGTTTACCGCACAGGCATCTTTAGCAACTTCGTTAAAAGCAAGCTGATTGCTTTAGGCTTTCTGATGATTTCCCTGCTCGGTGCCAAAGGCCGAAAAGACGAAAAGCTGGGGTATAAAACAGCTTTTGCCTACACCATTACAGGCTTGGTGCTTTATTTTTCGAGCTATCTTTCGATGCTGCTGGACATGCCTGTGCAGGAGAAGGCAGCCGTCTATATGGGCATTACTGCTATTGGGTTTCTATTGGTACTTTCAGGGGGCACTTTACTTTCCCGTATCATTAAAAGTAAATTCAACAACAAGGACATTTTCAATAAAGAAAACGAAACGTTTCCACAGGAAGAACGCCTGCTGGAAAACGAGTATTCCATCAATTTGCCGGCTCGTTACCACCTCAAGAATAAGGTGCGCAATAGCTGGGTCAATATCATTAATCCTTTCCGCTCCGTAATGGTATTGGGAACGCCGGGTTCAGGTAAATCGTACTTCGTTATACGGCATATCATTACCCAGCATATCCGTAAAGGGTTTACCATGTTCGTGTATGATTTCAAGTTTGACGACCTTTCAAGAATTGCCTACAACACATGGCTAAAAAATAAACATAAATATGCAACTCCACCGGTTTTTTACGTCATCAATTTTGACGACCTGACCCGTAGCCACCGATGTAATCCGTTAGAGCCATCTGCTATGACGGATATTACCGATGCTGCTGAAAGTGCCCGCACCATCCTGATGGGTTTGAACAGGGAATGGATTAAGCGGCAAGGCGACTTTTTTGTGGAATCGCCAATCAATTTTTTATCTGCGGTAATATGGTATCTGAAGAAATACAAGGACGGTGAATTTTGTACCTTGCCCCATGTCATCGAGTTGATGCAGGTGGATTACGATAGTTTGTTTACCCTGCTCAGGACAGAGAAGGAAATTGAGGTACTGATCAACCCTTTCGTTAACGCTTATCTCAATGATGTGATGGAGCAGTTGGAAGGTCAGATCGCAGCCGCAAAGGTCGCAATGGCAAGGCTCTCTTCACCACAATTATACTATGTGTTATCCGGAAACGACTTTAACCTTGATATAAACAATCCAGATGACCCGAAGATCGTTTGTATGGGTAACAATCCACAAAAGATACAGATCTACGGAGCAGTACTTTCTCTTTATGTGACCCGCCTTGTGAAGCAGGTCAATAAAAAAGGAAAATTGAAAAGCAGTCTGGTATTTGACGAGTTCCCGACGATTTATCTGAATAATATGGACAGCCTCATAGCCACGGCAAGAAGCAATAAGGTTTCCACCTGCTTAGGTATTCAGGATTTCAGCCAGCTTCGTAAAGATTATGGCCGGGAGCAGGCTGATGTGATTATGAATATTACAGGCAATATCGTGGCCGGTCAGGTCACGGGCGATACAGCAAAGCAGCTCTCCGAACGCTTCGGAAAAATCATGCAGGACAGGGAAAGTTATTCCATCAATAGCGGTGACACTTCTATCAGTCGTTCCAAGCAATTGGAAACTGCTATACCTCCCTCAAAAATATCGGCGTTAAGCTCAGGAGAGTTTGTGGGCATGATAGCCGATGACCCTGACAATAAAATAGAGCTAAAAGCCTTCCATTGTGAAATTATAAATGACCATGAAGCTCTAAAAAGAGAGGAAGAAAACTATAAAAATATCGAGGTAATCCGTAAGCTGGACAACAGCATGGTACAACGCAACTATTTTCAGATCAAGCAGGATATACAGGACATTATTCAGTCGGAAATGGAACGGTTACTGAATGATCCGGGACAGTCGCATTTGGTCATTAAAAAAGGATAA
PROTEIN sequence
Length: 664
MAVQTGENEQALRKILDMTRLISIVILVIHFYYYCYAAFQEWGLNSAFSDRILGNVYRTGIFSNFVKSKLIALGFLMISLLGAKGRKDEKLGYKTAFAYTITGLVLYFSSYLSMLLDMPVQEKAAVYMGITAIGFLLVLSGGTLLSRIIKSKFNNKDIFNKENETFPQEERLLENEYSINLPARYHLKNKVRNSWVNIINPFRSVMVLGTPGSGKSYFVIRHIITQHIRKGFTMFVYDFKFDDLSRIAYNTWLKNKHKYATPPVFYVINFDDLTRSHRCNPLEPSAMTDITDAAESARTILMGLNREWIKRQGDFFVESPINFLSAVIWYLKKYKDGEFCTLPHVIELMQVDYDSLFTLLRTEKEIEVLINPFVNAYLNDVMEQLEGQIAAAKVAMARLSSPQLYYVLSGNDFNLDINNPDDPKIVCMGNNPQKIQIYGAVLSLYVTRLVKQVNKKGKLKSSLVFDEFPTIYLNNMDSLIATARSNKVSTCLGIQDFSQLRKDYGREQADVIMNITGNIVAGQVTGDTAKQLSERFGKIMQDRESYSINSGDTSISRSKQLETAIPPSKISALSSGEFVGMIADDPDNKIELKAFHCEIINDHEALKREEENYKNIEVIRKLDNSMVQRNYFQIKQDIQDIIQSEMERLLNDPGQSHLVIKKG*