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SCNpilot_cont_1000_p_scaffold_157_29

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(27616..28713)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 349.0
  • Bit_score: 502
  • Evalue 1.20e-139
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 349.0
  • Bit_score: 502
  • Evalue 5.30e-139
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB35_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 349.0
  • Bit_score: 502
  • Evalue 3.80e-139

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1098
TTGGATAACGACATAGAAATAGAAGAGATTTGGGACGATGACGACCCGGATGCAGGGCATGAGGAAACGAATGAGCCTGTAGAGCGCCTGCGCATTGTTACCGATAAGCGGCAAGAGCCCCTGCGCATCGACAAGTTCCTCATGAACCGGGTGGAAGGCGCCACGCGCAACAAGATACAGCAGGCCCTTGATGAAGGTTTTATTACAGTAAACGGCAATGCCGTAAAACCCAACTATAAAGTAAAGGCAGGCGATGAAATAGTGGTACTGGACACTCGCCGCCCGGAGTCAACCGAAGTAATACCCGAAGAACTGCCTCTTAACATCGCCTACGAAGACGATGATATAATGATCATAAACAAGCCCGCTGGCATGGTAGTGCACCCCGGCTGTGGCAATTACAGCGGTACGCTGGTAAATGGCCTTGCCTGGTACCTGCAAAAAGAGGATATAGATACGGAAGATCTGCCACGCGTAGGCCTTGTGCACCGCATTGATAAAGATACCACAGGCCTCATAGTGATCGCAAAGAGCGAAAAAGCTATGGCCGACCTAAATGGCCAGTTTAAAAAGCATACGGTACACCGGCGCTACATAGCCCTTGTATGGGGCGACCTTACTGAAGACGAAGGCACCATAAACGCCCATATAGGTCGTAACCTGCGCTTTCGTAAAATTATGGACGCCTTTCCGGACGGGGAGCATGGTAAAGAAGCGATCACCCATTACAAAGTGCTGGAACGTTTTAATTACGTCACCCTCGTGGAGCTAAGACTCGAAACCGGCCGAACCCACCAGATAAGGGTACATATGAAACACATAGGACACCCCCTTTTTAATGATGCTACCTATGGTGGCGACCGTATTGTGAAGGGGACGGTATTTAATAAATACAAACAGTTCGTAGAGAATTGCTTTAAGATATTGCCCCGCCATGCCCTACATGCCAAGGAACTGGGCTTCACACACCCACATACGAGGGAGTGGATACAGTTTGACTCAGAACTTCCGGATGATATGATGCAGGTAATAGAGAAATGGCGCAGCTATACCAGTGGCATGACCCCTCAACTCAAAGGCAAGCTGGATGGGGAGTAA
PROTEIN sequence
Length: 366
LDNDIEIEEIWDDDDPDAGHEETNEPVERLRIVTDKRQEPLRIDKFLMNRVEGATRNKIQQALDEGFITVNGNAVKPNYKVKAGDEIVVLDTRRPESTEVIPEELPLNIAYEDDDIMIINKPAGMVVHPGCGNYSGTLVNGLAWYLQKEDIDTEDLPRVGLVHRIDKDTTGLIVIAKSEKAMADLNGQFKKHTVHRRYIALVWGDLTEDEGTINAHIGRNLRFRKIMDAFPDGEHGKEAITHYKVLERFNYVTLVELRLETGRTHQIRVHMKHIGHPLFNDATYGGDRIVKGTVFNKYKQFVENCFKILPRHALHAKELGFTHPHTREWIQFDSELPDDMMQVIEKWRSYTSGMTPQLKGKLDGE*