ggKbase home page

SCNpilot_cont_1000_p_scaffold_426_27

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24600..25829)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 408.0
  • Bit_score: 755
  • Evalue 3.90e-215
isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 407.0
  • Bit_score: 748
  • Evalue 1.40e-213
  • rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM91_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 407.0
  • Bit_score: 748
  • Evalue 4.40e-213
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGCAAAAATCAAAGTTGCAAATCCTGTTGTAGAACTGGATGGTGATGAAATGACCCGCATCATCTGGAAATTCATCAAAGACAAACTTATACTTCCATATGTAGATGTGGAAATAAAATATTTTGACCTCGGTATAGAGCATCGTGATGCCACTAATGACCAGGTGACCGTAGATGCGGCCAATGCTATAAAAGAGTGCGGTGTAGGCATAAAATGTGCCACCATAACACCCGATGAGGCACGCGTGGAAGAATTCAAGCTGAAGCAAATGTGGAAAAGCCCCAACGGCACCATACGTAATATACTGGACGGCACCGTGTTCCGCGAGCCGATAGTGATCAATAACATACCGCGCCTGGTACCCAACTGGACCGCTCCTATATGCATAGGCCGCCATGCCTTTGGCGACCAATATCGCGCTACCGATTTTGTGACAAAAGGCAAAGGCAAGCTGACCATAAAATTTGAAGGAGAGAACGGCGAAGTGATCGAGCATGAAGTGTTCAACTTCAAAGGCGACGGTGTGGCACTGGCCATGTACAATACCGATGAATCGATCATGGGTTTTGCACGCGCCTGCTTCAATACAGCTTTGCAAAAAGGCTGGCCGCTGTACCTCTCGACGAAGAATACCATCCTGAAAAAGTATGACGGCCGCTTTAAAGACATCTTTGAAAATATTTATCAAACAGAGTTCAAAGCCGATTTTGAAAAGGCAGGTATCACTTATGAGCACCGACTGATAGATGATATGGTGGCCAGCGCACTGAAATGGCATGGTAACTTTGTGTGGGCCTGCAAAAACTATGATGGCGATGTGCAGAGCGATACCGTAGCACAAGGCTTCGGCTCGCTGGGCCTGATGACATCAACGCTCATCACCCCCGATGGAAAGACCATGGAAGCCGAGGCCGCACATGGCACGGTGACCCGCCACTACCGCAACCACCAGGAAGGCAAGCCTACATCTACCAACCCTATAGCCTCCATCTTTGCATGGACAAGGGGCCTGATGTTCCGCGCCAAGCTGGACAACAACCCCGAACTCAACGACTTCTGCCAGGCACTGGAGCAGGTATGCATAGAAACCGTAGAAAGCGGCAAGATGACCAAAGACCTCGCGGTGTGCATACATGGCAATAAAGTGGAACATGGGACACATTATCTCTACACCGAGGAATTCCTGGATGCGCTGGATGAGAACTTGAAAAAGAAAACAGGCAAATAA
PROTEIN sequence
Length: 410
MAKIKVANPVVELDGDEMTRIIWKFIKDKLILPYVDVEIKYFDLGIEHRDATNDQVTVDAANAIKECGVGIKCATITPDEARVEEFKLKQMWKSPNGTIRNILDGTVFREPIVINNIPRLVPNWTAPICIGRHAFGDQYRATDFVTKGKGKLTIKFEGENGEVIEHEVFNFKGDGVALAMYNTDESIMGFARACFNTALQKGWPLYLSTKNTILKKYDGRFKDIFENIYQTEFKADFEKAGITYEHRLIDDMVASALKWHGNFVWACKNYDGDVQSDTVAQGFGSLGLMTSTLITPDGKTMEAEAAHGTVTRHYRNHQEGKPTSTNPIASIFAWTRGLMFRAKLDNNPELNDFCQALEQVCIETVESGKMTKDLAVCIHGNKVEHGTHYLYTEEFLDALDENLKKKTGK*