ggKbase home page

SCNpilot_cont_1000_p_scaffold_331_38

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(39020..40753)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 537.0
  • Bit_score: 359
  • Evalue 8.10e-96
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 537.0
  • Bit_score: 359
  • Evalue 2.60e-96
  • rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU58684.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 537.0
  • Bit_score: 359
  • Evalue 1.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1734
ATGAGCCTGAGGAGCCTGCGCGGCATTTATCATATAATATCAGTACTGCTTGCAGCCTGTGCCTTTTTCTCATCGAAAGGGCAGGACCTGAAGATGCCCATGATCACCGACGATGAGCGGGCCGATTCTATCTATTACGATGCCATAAAGGCCCGTATGCTGGATGATGATAAGCTGGCTATGACATTGTTGCAGGATGTGGTGGCTATAAAGCCCGGTGAAGCAGCACCGTATTACGATCTTGCCCAGTTGTATGCCCGGGATAAGAATATTGGCAAGGCCAAAGAGTATATCAAAAAGGCAATAGCCCTTAATGATAAAAATAAGTGGTATAAAGACCAATATGCCAATATACTGGCGATAGATAACCAGTATGAAGAAGCCGCAGTTATATACAGCCAGCTGGCTAAAGAAGAAAAAGAGAATAAGGACTATATGCTAAAGGCAGCCCTGCTCTATGAGCGGGCGGGCAAGCATAATGAGGCCCTGGCCATGCTGGATAAGCTGGCAGAGAAAGCAGGCGACGATGATGCCTACCTGCAGCAAAAGCAGCAGATATACCTGCGGATGAATGACCTGGACAATGCGGCGAAAGTAACCCAGCAACTGATAGACAATAACCCGGGCGATGGGCGCTATTATGTATTGCTGGCAGAGCTGTATGAGAACAATAAGGAGCCGGCAAAGGCAATGGAGATATTCAAAAAGGCGCAGGAAGAACTGCCTGACGATCCGGATATACAGCTGGGTATTGCAGAACACTACAGGCGCACAAATGATACGGTAAAGTATACCGAATACCTGAAAAAACTGGTGACGAATAAAGACCTGGATGCAGAATCGCAGATGGGTATGCTGATAGAGTTGATGCAGGAGGCGGGTGATGACAGCCTGAAGAAAAAGGAAGCGCTGCAGATAGCGGGTAAGCTTGCTGAATTGCATCCACAAAATGCACAGGTGCAGGACATATACGGCCAGGTACTGGTAATGGAGGGCGAACCGAAGGCCGCAGCAGCACAATTCAGACGCTCACTGGCGATAGACCAGTCGCACTTTGATGTGTGGCAACGCCTGTTGTCTGCATATACGGCAAAAAAGGACGCTGATTCGCTGATCTATTACAGCGAAAAAGTGATCAGGCTTTTCCCCAACCAGGCGCTGGCCCACTTTATGAATGGCCTGGGCCACCTGAACAAAAAGGAATACGGCAAAGCTGCGAATGCCATCAACCGTGCTATAGACCTGCAACCTGAAAATAATGTGGGCCTGCTTGCCGAGATGTATTCTACACTGGGTGATCTTTATTACCTGGATAAACAATATACACAGTCGGACAGCAGCTATTCGAAAGCTATAGCGCTACAGCCCGATGATGCCACGATGCTGAACAATTACAGTTACTACCTGTCGGAGCGGGGCATAAGACTCGATGAGGCTGAAAAGATGTCGAAACGCTCGCTGGAGCTGCGCCCTGAGGAGCCTACCTACCTGGATACCTATGGCTGGATACTGTATAAGAAAGGGAGGTATGAAGAGGCCAAAAAGTATATAGAAAAAGCTATAAACGACAGTAAAGGCAATGCTGACGCTACTTTGTATGAGCATATAGGCGACATATACTATAAGCTGAACGATGCAGATAAAGCTATTGAGCAATGGAAGAAGGCAAAGGAAAAAGGTAATGATACCCCTGAACTGGATAAAAAAATTAAAGATAAGAAGCTGTATGAATAA
PROTEIN sequence
Length: 578
MSLRSLRGIYHIISVLLAACAFFSSKGQDLKMPMITDDERADSIYYDAIKARMLDDDKLAMTLLQDVVAIKPGEAAPYYDLAQLYARDKNIGKAKEYIKKAIALNDKNKWYKDQYANILAIDNQYEEAAVIYSQLAKEEKENKDYMLKAALLYERAGKHNEALAMLDKLAEKAGDDDAYLQQKQQIYLRMNDLDNAAKVTQQLIDNNPGDGRYYVLLAELYENNKEPAKAMEIFKKAQEELPDDPDIQLGIAEHYRRTNDTVKYTEYLKKLVTNKDLDAESQMGMLIELMQEAGDDSLKKKEALQIAGKLAELHPQNAQVQDIYGQVLVMEGEPKAAAAQFRRSLAIDQSHFDVWQRLLSAYTAKKDADSLIYYSEKVIRLFPNQALAHFMNGLGHLNKKEYGKAANAINRAIDLQPENNVGLLAEMYSTLGDLYYLDKQYTQSDSSYSKAIALQPDDATMLNNYSYYLSERGIRLDEAEKMSKRSLELRPEEPTYLDTYGWILYKKGRYEEAKKYIEKAINDSKGNADATLYEHIGDIYYKLNDADKAIEQWKKAKEKGNDTPELDKKIKDKKLYE*