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SCNpilot_expt_500_bf_scaffold_1540_33

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 29662..30921

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 422.0
  • Bit_score: 762
  • Evalue 1.80e-217
  • rbh
Response regulator receiver protein {ECO:0000313|EMBL:ENY81379.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 422.0
  • Bit_score: 762
  • Evalue 2.50e-217
response regulator receiver protein; K02282 pilus assembly protein CpaE similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 424.0
  • Bit_score: 704
  • Evalue 2.40e-200
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
GTGAACGCGCCTTTCAAAGCAGCCGGGCTGCGTGACCCGTTCAACGCCTTTGTGTGCGACGACGATACGCTGGAGCTGATCCGCGTCGCCGCCGCCGACATGGGCTGGCCCATCGAGAAGTGCAACAAGGGAGGCCTGCGCAACGCGGTGCAGTCGCTGTCGGTCTCTGCGAGCCCGAATATCCTGTTCGTCGACATGTCCGAGTCGGGCGATCCGATCAACGACATCAACGCGCTGGCGGAGGTCTGCGAACCCGGCACCGTCGTCATCGCGGCGGGCCAGGTCAACGACGTTCGCCTCTATCGCGATCTCTTGTCGAGCGGCATTCAGGATTACCTCCTGAAACCGCTGTCGCTCGATCAGGTCCGCGACGCGCTGCCCAATGCGCAGGCGATCCTTTCGGCCATGGCGGTCGTCGGCGTGCGCGGCGGCGTCGGCGCCTCGATGGTGTCGACCTCGCTCGCCTGGGCGATCAGCGAACAGGCCGACCGCCAGACCGCGCTGCTCGACCTCGACGTGCATTTCGGCACCGGTGCGCTGACGCTCGATCTCGAACCCGGCCGCGGGCTGATCGACGCGATCGACAATCCCAGCCGTATCGACGGGCTGTTCATCGAACGCGCCATGGTGCGCGCCTCGGACAAGCTCAGCCTGCTGTCGGCCGAAGCGCCGATCCACCAGCCGGTGATGACCGACGGTTCGGCCTTCTATCAGCTCGAGGAAGAGCTGCGGAACGCGTTCGAGATGACGATCGTCGATATTCCGCGTCAGGTTCTCATCCCCTTCCCGCACCTCGTGTCGGAATGCGGAACGATCCTGCTCGTCACCGACGTCACGCTGGCTTCGGCGCGCGATACGATCCGTCTCCTGTCGTGGTTCAAGCAAAATGTGCCGGGCGCGCGCGTCGTGCTCGTCGCGAACAAGTTCCAGACCACGATCGGCGAATTGTCGCGCAAGGAATTCGAATCGTCGATCGAGCGCGCGATCGATGTCGTCGTCCCCTTCGACCCCAAGCTTGTCGCGCAGGCGGCCAAGCTCGGCAAATCCTATGCCGAGGTGTGCAAGGGAACCAAGGCCGGCCAGGTCTGGGCCAATCTGACGCGCGTCATCCTCGACGGGGCCGATGCCGAAGCCGAAGAGGTGGCACCGGCGAAAGCAAAATCGGGCAGCTCGCTGCTCGGCAAGCTGGGCGGTCTGGGTACGCTCGTCAAAAAAGGCGCGACGCGACCACAGCGGGAACGGGGCAAAGGGCGATCATGA
PROTEIN sequence
Length: 420
VNAPFKAAGLRDPFNAFVCDDDTLELIRVAAADMGWPIEKCNKGGLRNAVQSLSVSASPNILFVDMSESGDPINDINALAEVCEPGTVVIAAGQVNDVRLYRDLLSSGIQDYLLKPLSLDQVRDALPNAQAILSAMAVVGVRGGVGASMVSTSLAWAISEQADRQTALLDLDVHFGTGALTLDLEPGRGLIDAIDNPSRIDGLFIERAMVRASDKLSLLSAEAPIHQPVMTDGSAFYQLEEELRNAFEMTIVDIPRQVLIPFPHLVSECGTILLVTDVTLASARDTIRLLSWFKQNVPGARVVLVANKFQTTIGELSRKEFESSIERAIDVVVPFDPKLVAQAAKLGKSYAEVCKGTKAGQVWANLTRVILDGADAEAEEVAPAKAKSGSSLLGKLGGLGTLVKKGATRPQRERGKGRS*