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SCNpilot_expt_1000_bf_scaffold_3127_9

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 8805..9761

Top 3 Functional Annotations

Value Algorithm Source
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 318.0
  • Bit_score: 517
  • Evalue 3.10e-144
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrob similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 318.0
  • Bit_score: 517
  • Evalue 1.40e-143
UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase n=2 Tax=Agrobacterium RepID=Q7CXW9_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 318.0
  • Bit_score: 517
  • Evalue 9.80e-144

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCCGATAGGATTGTTGGGGTTTCAGACGACGATTGCCAGCCCGGTGGGGCTTGACGGCATCGGCGTGCATTCGGGAACCCCCGTCTCGATCATGTTCCACCCGGCCGAGGCCGGCACGGGCATCGTCTTCCAGCGGGTGACGGATGGTGAGGTTGTGGCCGAGGTGAGGGCAGTGTCCTCGCAGGTCGGCAATACCGATCTCTGCACTGTGCTCGGCGTTCAGCCTGACCATTCCATCGCCACCGTCGAGCATGTGATGGCCGCGCTCTACGCCATGGGCATCGACAATATCGTCGTCGAGGTTCATGGCGCCGAAATGCCGATCATGGACGGTAGCTCGGAGCCCTTCATCGAAGCCGTCGAGCAGGTCGGTACGAAGACGCTCGGCGTCAAGCGCCGCTATATCCGCGTCGTCAAGCCGGTACGCATCGAATCGGGTGCGTCCTGGTCGGAATTCCTGCCCTATGACGGAACCCGCTTCGAGGTGGAGATCGATTTCGAAACGCCGCTGATCGGCCGCCAGTCCTGGAAGGGCGACCTGACCGCCCAGACCTTCAAGGCAGAGCTGTCGCGGGCCCGCACCTTCGGTTTCATGCGTGATGTCGAGCGCCTGTGGGCCGCCGGTTATGCGCTGGGCTCTTCTCTGGAAAATTCGGTCGTCATTTCCGACGATCACGCCGTGATCAACATCGAGGGCCTGCGCTACAAGGGCGATGAGTTCGTGCGCCACAAGACGCTGGATGCGGTCGGCGACCTCGCCATGGCCGGCGCCCAGTTCATCGGCTGCTATCGATCCTATCGCGGCGGCCATCGCATGAACGCCCAGGCGCTGAAGGCGCTGCTCAGCGATCCCACCGCTTACGAGGTGGTCGAGCCGCCGGCAGCCCGCCAGCGAGTCGGCGCCCGGGAATTCGTGGCGGTCAACGCGCCGGAATTCGCGCCCTGGTCGGCATAA
PROTEIN sequence
Length: 319
MPIGLLGFQTTIASPVGLDGIGVHSGTPVSIMFHPAEAGTGIVFQRVTDGEVVAEVRAVSSQVGNTDLCTVLGVQPDHSIATVEHVMAALYAMGIDNIVVEVHGAEMPIMDGSSEPFIEAVEQVGTKTLGVKRRYIRVVKPVRIESGASWSEFLPYDGTRFEVEIDFETPLIGRQSWKGDLTAQTFKAELSRARTFGFMRDVERLWAAGYALGSSLENSVVISDDHAVINIEGLRYKGDEFVRHKTLDAVGDLAMAGAQFIGCYRSYRGGHRMNAQALKALLSDPTAYEVVEPPAARQRVGAREFVAVNAPEFAPWSA*