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SCNpilot_expt_1000_bf_scaffold_3127_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 18877..19488

Top 3 Functional Annotations

Value Algorithm Source
Sco copper chaperone family protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003728A03 similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 130.0
  • Bit_score: 223
  • Evalue 1.40e-55
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EYR77772.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 129.0
  • Bit_score: 222
  • Evalue 4.50e-55
senC; putative cytochrome C oxidase assembly factor; K07152 similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 129.0
  • Bit_score: 210
  • Evalue 4.00e-52

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCTGTCGAAGGGGGTCGGAATGTCCGTCAAGCGTTTCCGTATCATGATTTGGGTCGCCATCGTCATCGTCGCCGGCGTGCTCGGCTGGCTGACGCTGGAAATGACCAGAACGCGCCAGGACATCGCTGCCGGTCCCTACGGGGTGCCGTTCCAGCTCGTCGCCCAGGACGGCAAGCCGATCACCGAGCAGGCGTTTCGCGGCAAGCCTTCGGCGGTGTTCTTCGGCTTCACCCATTGCCCCGAGGTCTGCCCGACCACGCTTTTCGAACTCGACGGCTGGCTCGCCAAGGTCGATCCCGACGGCAAAAAGCTGAACGCCTATTTCATCACCGTCGATCCCGAACGCGATACGCCGGAGATTATCGGCGAGTATGTCTCCAACGTTTCCAAGCGCATCGTCGGCATTTCCGGGGGTTCCGCGTCTACGCCAAGAAGGTTCCGCTCGACGAGAAGGATCCGAACGGCGACTATACGATGGACCATACGGCCTCGGTCTTCCTGCTCGATGGCGCCGGGCGCTTCGCCGGCACCATCGCCTATGAGGAAAACCCGGAAACCGCAGTCCAGAAGCTGGAAAACCTGGCGAAGAAGGGCTGATTCGCGCTTTTGA
PROTEIN sequence
Length: 204
MLSKGVGMSVKRFRIMIWVAIVIVAGVLGWLTLEMTRTRQDIAAGPYGVPFQLVAQDGKPITEQAFRGKPSAVFFGFTHCPEVCPTTLFELDGWLAKVDPDGKKLNAYFITVDPERDTPEIIGEYVSNVSKRIVGISGGSASTPRRFRSTRRIRTATIRWTIRPRSSCSMAPGASPAPSPMRKTRKPQSRSWKTWRRRADSRF*