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SCNpilot_expt_1000_bf_scaffold_3127_20

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(22795..23106)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6L9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 101.0
  • Bit_score: 138
  • Evalue 4.10e-30
Branched-chain amino acid transport {ECO:0000313|EMBL:EHS51583.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 101.0
  • Bit_score: 138
  • Evalue 5.70e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 101.0
  • Bit_score: 135
  • Evalue 1.10e-29

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGAAAACCTGTTCAACAGCGACATGGTCATCCTCATCCTGCTCTGCGCCGTCGCCACCTTCGCGACGCGCATCGGCGGCTATGTATTGATCACCCGGCTGAAAAGCATCCCGCCACGGCTCGACGCCGCCCTGAACGCCGTTCCTGCCGCGGTGCTGACCACGCTCGTTGCGCCGGCGTTTTTCGCCGGCGGCATCGAAGTCAAGGTGGCGATGGCCGTCGCCCTGGTGATCGGCCTGCGATTCTCGGCCATGCCGATGCTGGCCATCGGCTGGCTGGTCGTCATGGGGTTCCGTCACATCCTCAATTGA
PROTEIN sequence
Length: 104
MENLFNSDMVILILLCAVATFATRIGGYVLITRLKSIPPRLDAALNAVPAAVLTTLVAPAFFAGGIEVKVAMAVALVIGLRFSAMPMLAIGWLVVMGFRHILN*