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SCNpilot_expt_1000_bf_scaffold_6810_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobium_63_7

partial RP 36 / 55 MC: 3 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 694..1476

Top 3 Functional Annotations

Value Algorithm Source
UspA domain protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B7J4_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 258.0
  • Bit_score: 179
  • Evalue 4.00e-42
UspA domain protein {ECO:0000313|EMBL:CDN94556.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 259.0
  • Bit_score: 361
  • Evalue 1.00e-96
UspA domain protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 258.0
  • Bit_score: 179
  • Evalue 1.30e-42

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
TTGGCTCTTCAGTGGCAGGCGCGTCTGACGGTGGTTCATGTGATCGAAGACGAAGACGACTTCCTTGAGCAGCCTGAGATGAGCTCTGTTCCGCGCGCCGTTTCGCGCAACGCTATACGCCTGCGTGAAGAGCTTACAGGTATTGATGGGCTCATAAGCGCCGTCGTCGTCAGACGAGGCCGTCCACTCGTCGAGATCAAGGAGATCGCTTTATGGGATAAAGCTGATCTGATCGTCACGGGAATATCGCGCAACGAAACCGATGGTCGGTCCTTATTGGGCAGCACGACGACGTCTCTATTGCGAGAGAGCGGACTGCCCGTGCTTGTGGTGAAAAAGAAGTCGGTCGATACAGGCGACCGGATTGTCGTAGCGACAGATGTTTCCCCGGCTGCGTCTGCCGTGCTCGAAACCACTGTCAGGTTCTTCCGACCTGAAACCCTTATTCTGTTCCATGCATTCGATCCTCCGTTCAAGAACTGGGTCGAGAACAAAGAGGCTTATAGTCACCAGTTCTCAAAAGATATCGCCCAACGAGCCAGAGACACCCTGGATCAATCTCTGATGACAGGCGGAGCTTGCCAGGTTCAAGTCGTCACGCTGGAGGGCGATCCAGCGGGGCAACTGGCTGAATATGTCGACGATAACGATATTGATCTGGTGATTGCCGGCACAGAAAGCAGGAGCACGATCCTGAACCTGTTTATCGACAGTGTGGCAGGCAATATTCTCCATGAGGTCCAGTGTGACATCATGATCGTTCCTAGCCATGCTCATCTTTGA
PROTEIN sequence
Length: 261
LALQWQARLTVVHVIEDEDDFLEQPEMSSVPRAVSRNAIRLREELTGIDGLISAVVVRRGRPLVEIKEIALWDKADLIVTGISRNETDGRSLLGSTTTSLLRESGLPVLVVKKKSVDTGDRIVVATDVSPAASAVLETTVRFFRPETLILFHAFDPPFKNWVENKEAYSHQFSKDIAQRARDTLDQSLMTGGACQVQVVTLEGDPAGQLAEYVDDNDIDLVIAGTESRSTILNLFIDSVAGNILHEVQCDIMIVPSHAHL*