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scnpilot_solids2_trim150_scaffold_7859_2

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(200..685)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035EAAE6 similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 149.0
  • Bit_score: 149
  • Evalue 2.70e-33
AraC family transcriptional regulator {ECO:0000313|EMBL:EWT04925.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 152.0
  • Bit_score: 182
  • Evalue 5.40e-43
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 151.0
  • Bit_score: 143
  • Evalue 4.70e-32

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGACCGCTTTCGAGCTCACGGAGAACGAAGCGCGGGACACCGCCGTCGTGCGCAGCTCGGTGCCGATCAGCGCGATCCCATCCCTGTTCGGCCGCGCGCTTCCCGCCGTTTCCCGCGTCCTGGCTGCCCAGCACATCCACCCGGTCGGACCGCCGTTCGCAAAGTATCTGGGGCCACCCGGCGACACGGTCGACCTCGAGGTCGGCTTCCCGGTGTCCCGCCCGGTGAGCCCCGCCGGTGACGTCATCGCATCGACACTTCCGGCCGCGCCGGCCGTGCACGGCACGCACGTCGGACCGTATGAAGACCTGCACCGCACCTATGACGAGATGTTCGCGTGGATGAAGAAGCAGGAATTGGAGCCGGACGAGGTGATGTGGGAGATCTATCTGTCCGATCCGTCGGCCGAACCCGATCCCGCCGCGTGGCGCACCGAGGTTTGGTGTCCGGTGACCCGGACGCCGCACGAACCCCCTGCCGGTTGA
PROTEIN sequence
Length: 162
MTAFELTENEARDTAVVRSSVPISAIPSLFGRALPAVSRVLAAQHIHPVGPPFAKYLGPPGDTVDLEVGFPVSRPVSPAGDVIASTLPAAPAVHGTHVGPYEDLHRTYDEMFAWMKKQELEPDEVMWEIYLSDPSAEPDPAAWRTEVWCPVTRTPHEPPAG*