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scnpilot_solids2_trim150_scaffold_14_curated

Search features with annotation key words

Displaying items 121-150 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_14_curated_121
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128252..128875
DNA (624bp) protein (208aa)
Ribonuclease n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J891_9RHIZ
Ribonuclease {ECO:0000313|EMBL:EMG54836.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
ribonuclease T2
scnpilot_solids2_trim150_scaffold_14_curated_122
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128978..129574
DNA (597bp) protein (199aa)
glutathione S-transferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003122F03
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AEH89626.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_14_curated_123
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129641..130336)
DNA (696bp) protein (232aa)
Porin n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C3B1_9RHIZ
Porin {ECO:0000313|EMBL:EIM76313.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
porin
scnpilot_solids2_trim150_scaffold_14_curated_124
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130632..131396
DNA (765bp) protein (255aa)
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQG7_9RHIZ
Short chain dehydrogenase {ECO:0000313|EMBL:EHK57025.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_14_curated_125
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131393..133480
DNA (2088bp) protein (696aa)
UvrABC system protein C n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQG6_9RHIZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
scnpilot_solids2_trim150_scaffold_14_curated_126
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133580..134164
DNA (585bp) protein (195aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKP8_RHITR
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KGF69215.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
scnpilot_solids2_trim150_scaffold_14_curated_127

Not on your lists

134148..134438
DNA (291bp) protein (97aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003119F17
Uncharacterized protein {ECO:0000313|EMBL:KKN97427.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
molybdopterin converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit
scnpilot_solids2_trim150_scaffold_14_curated_128
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134447..134920
DNA (474bp) protein (158aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
UPI0003CFEFF4 related cluster n=1 Tax=unknown RepID=UPI0003CFEFF4
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:ESZ17869.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
scnpilot_solids2_trim150_scaffold_14_curated_129
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135147..135569)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=NDK_MESSB
scnpilot_solids2_trim150_scaffold_14_curated_130
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135743..136255
DNA (513bp) protein (171aa)
Mlr7920 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984N6_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA72260.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
scnpilot_solids2_trim150_scaffold_14_curated_131
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136355..138232
DNA (1878bp) protein (626aa)
glycosyl transferase family 1 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031112A8
ABC transporter, ATP-binding component {ECO:0000313|EMBL:EHK57039.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
scnpilot_solids2_trim150_scaffold_14_curated_132
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138569..139849
DNA (1281bp) protein (427aa)
UPI0003CED0FA related cluster n=1 Tax=unknown RepID=UPI0003CED0FA
Membrane protein {ECO:0000313|EMBL:ESY83112.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
metalloendopeptidase-like membrane protein
scnpilot_solids2_trim150_scaffold_14_curated_133
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139860..140219)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377015A
Uncharacterized protein {ECO:0000313|EMBL:EZQ15111.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_134
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140441..140929
DNA (489bp) protein (163aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003796DAA
Uncharacterized protein {ECO:0000313|EMBL:CDX37164.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
RDD domain-containing protein
scnpilot_solids2_trim150_scaffold_14_curated_135
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141434..144364)
DNA (2931bp) protein (977aa)
DNA modification methyltransferase-related protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PXK8_9RHIZ
DNA modification methyltransferase-related protein {ECO:0000313|EMBL:CDI09830.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
DNA modification methyltransferase-related protein
scnpilot_solids2_trim150_scaffold_14_curated_136
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144676..147696)
DNA (3021bp) protein (1007aa)
DNA-directed DNA polymerase B n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD110E
Uncharacterized protein {ECO:0000313|EMBL:KCZ60298.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
DNA polymerase type B
scnpilot_solids2_trim150_scaffold_14_curated_137
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147708..148079)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD110F
Uncharacterized protein {ECO:0000313|EMBL:KCZ60299.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
scnpilot_solids2_trim150_scaffold_14_curated_138
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148093..148671)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003622F2B
Uncharacterized protein {ECO:0000313|EMBL:KCZ49716.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
scnpilot_solids2_trim150_scaffold_14_curated_139
unknown

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comp(148790..149485)
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_14_curated_140
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149556..150692
DNA (1137bp) protein (379aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036F0B65
CRISPR-associated protein Cas1
scnpilot_solids2_trim150_scaffold_14_curated_141
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151125..153845
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EI89_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ35883.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
scnpilot_solids2_trim150_scaffold_14_curated_142
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154312..155901
DNA (1590bp) protein (530aa)
UPI0003CEBEAE related cluster n=2 Tax=unknown RepID=UPI0003CEBEAE
Uncharacterized protein {ECO:0000313|EMBL:ESY39084.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_143
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156837..159557
DNA (2721bp) protein (907aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4H7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX30302.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
multidrug ABC transporter; K02021 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_14_curated_144
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159600..160055
DNA (456bp) protein (152aa)
cyclic nucleotide-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI0003718F24
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_14_curated_145
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160064..160438)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IH89_RHIML
Protein of unknown function (DUF3307)
Uncharacterized protein {ECO:0000313|EMBL:CCF00517.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
scnpilot_solids2_trim150_scaffold_14_curated_146
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160578..161987
DNA (1410bp) protein (470aa)
cyaH; adenylate/guanylate cyclase (EC:4.6.1.1)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56649.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_14_curated_147
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162047..164323
DNA (2277bp) protein (759aa)
Adenylate cyclase protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I251_9RHIZ
Adenylate cyclase protein {ECO:0000313|EMBL:EHK52937.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
adenylate/guanylate cyclase
scnpilot_solids2_trim150_scaffold_14_curated_148
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164421..164921)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B2R3_RHILS
Uncharacterized protein {ECO:0000313|EMBL:AHF84518.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_14_curated_149
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164963..165553)
DNA (591bp) protein (197aa)
ankyrin n=1 Tax=Rhizobium mongolense RepID=UPI0003B65E81
Ankyrin {ECO:0000313|EMBL:KGD99945.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ankyrin
scnpilot_solids2_trim150_scaffold_14_curated_150
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165902..166591)
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ATP-binding protein of ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCJ8_9RHIZ
ABC transporter
Displaying items 121-150 of 248 in total

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