ggKbase home page

SCN18_30_10_14_R3_B_scaffold_43_48

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(42906..43610)

Top 3 Functional Annotations

Value Algorithm Source
variant PEP-CTERM exosortase signal id=12496886 bin=THIO_MID species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 480
  • Evalue 5.70e-133
variant PEP-CTERM exosortase signal similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 238.0
  • Bit_score: 234
  • Evalue 2.00e-59
Variant PEP-CTERM exosortase signal {ECO:0000313|EMBL:AEF99396.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 238.0
  • Bit_score: 234
  • Evalue 1.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAAAATCAAACTTGCAGCACTGGCCGCCATGCTGGCCGCCTCGCCCGTCTTCGCCGACACCACGAATGGTCCCGACTCGTATGCCTACGGATTCGAAACCCCCACCGAGGCAAGCTGGGGAGGCTGGAATCGCGGTGACGCAAATACGATCTACGCCGAATGGGACACGTTTGTCGATATCACGTGGCCTGGCGACCGTACCGCGGCTCCCGACGTCGGCGCCTCGGGCACCAGCGATGCCAACATTGCCTGGAACAGCGGTGTCTTCCCGGCCAGCACAGGCAACCTCTACAGCTTCAGTGTGGACGAGTATTTCGACATCAACATGACTGGCACAGTGCCCACCGGTCCGGTCCGTGTCGTGTTGCAGACCGAGGCTTGGGGCATGGACCCGACTTCAGTTTTGCTGAATGACCTGGCGCCAACCTTTTCCTCGACAACTTTCACCGGCACGGTCATGACGGGCGCAATCGGCGAGGTGGATCTTTTCCAGAACGTCTACTACTGGGATCTCGCGAGCGCCCCGAGCAATTATTACTTCGCAATTGATGCGCCGGTCCACACTTCCTTCGCCCAGGTCGCGGTCGATATTGCCGCCGCACCGGTGCCCGAGCCCGAAACCTACGCCATGCTCGCCGCCGGCCTCGGTCTGGTCGGCTGGCAGGTGCGTCGTCGTAACAAGGCCGCCAAGCTGGCGGCATGA
PROTEIN sequence
Length: 235
MKIKLAALAAMLAASPVFADTTNGPDSYAYGFETPTEASWGGWNRGDANTIYAEWDTFVDITWPGDRTAAPDVGASGTSDANIAWNSGVFPASTGNLYSFSVDEYFDINMTGTVPTGPVRVVLQTEAWGMDPTSVLLNDLAPTFSSTTFTGTVMTGAIGEVDLFQNVYYWDLASAPSNYYFAIDAPVHTSFAQVAVDIAAAPVPEPETYAMLAAGLGLVGWQVRRRNKAAKLAA*