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SCN18_30_10_14_R3_B_scaffold_71_7

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(5594..7015)

Top 3 Functional Annotations

Value Algorithm Source
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) id=12496249 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 983
  • Evalue 5.50e-284
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 473.0
  • Bit_score: 958
  • Evalue 4.10e-277
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 473.0
  • Bit_score: 958
  • Evalue 2.00e-276

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGCAGTGAAAACCTACCAGGCCGGGGTAAAGGAATACCGGCAGACCTACTGGATGCCGGAGTACACCCCTCTGGATACCGACATCCTCGCCTGCTTCAAGATCACCCCGCAGCCGGGTATCGATCGTGAAGAAGCTGCCGCCGCCGTGGCCGCCGAATCGTCGACCGGCACCTGGACCACCGTCTGGACCGACCTCCTGACGGACATGGACTACTACAAGGGTCGCGCCTATCGCATCGAAGACGTGCCGGGCGACGACACCTGTTTCTATGCCTTCATCGCCTACCCGATCGATCTCTTCGAAGAGGGCTCGGTCGTCAACGTGTTCACCTCGCTGGTCGGCAACGTGTTCGGCTTCAAGGCCATCCGCGCCCTGCGTCTGGAAGACATCCGCTTCCCGATCGCCTACGTCAAGACCTGTAACGGCCCACCCAACGGCATCCAGGTCGAGCGCGACGTGATGAACAAGTATGGCCGTCCGCTGCTGGGCTGCACCATCAAGCCGAAGCTGGGTCTGTCGGGCAAGAACTACGGCCGCGCCGTGTACGAATGTCTGCGCGGCGGTCTGGATTTCACCAAGGACGACGAAAACATCAACTCCCAGCCGTTCATGCGCTGGAAGCAGCGTTTCGACTTCGTCCAGGAAGCCACCCTGAAAGCCGAAGCCGAAACCGGCGAACGCAAGGGTCACTACTTGAACGTCACGGCCCCGACGCCTGACGAAATGATGAAACGCGCCGAGTATGCCAAGGAAATCGGCGCGCCGATCATCATGCACGACTACATCACCGGCGGCTTCTGCGCCAACACTGGTCTGGCTCAATGGTGCCGCGACAACGGCATGCTGCTGCACATCCACCGCGCCATGCACGCCGTGCTCGACCGCAACCCGCACCACGGCATCCACTTCCGCGTGCTGACCAAGATCCTGCGTCTGTCGGGCGGCGACCACCTGCACACCGGTACCGTTGTGGGCAAACTCGAAGGCGACCGCGCCTCGACGCTCGGCTGGATCGACCTGCTGCGTGAATCCTTCGTGCCGGAAGACCGCAGCCGCGGCATCTTCTTCGATCAGGACTGGGGTTCCATGCCCGGCGGCTTCGCCGTGGCTTCGGGCGGTATCCACGTGTGGCACATGCCCGCGCTGGTCACCATCTTCGGCGACGACTCCGTGCTGCAGTTCGGCGGCGGTACGCTGGGCCACCCCTGGGGCAACGCCGCCGGCGCACACGCCAACCGCGTCGCGCTGGAAGCCTGCGTCCAGGCGCGCAACGAAGGTCGTGCCATCGAGAAGGAAGGCAAGGAAGTGCTGACGGCCGCCGCTGCGCACTCGCCCGAACTGAAGATCGCCATGGAAACGTGGAAAGAGATCAAGTTCGAGTTCGACACCGTCGACAAGCTGGACATCGCGAACAAGTAA
PROTEIN sequence
Length: 474
MAVKTYQAGVKEYRQTYWMPEYTPLDTDILACFKITPQPGIDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTCFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDIRFPIAYVKTCNGPPNGIQVERDVMNKYGRPLLGCTIKPKLGLSGKNYGRAVYECLRGGLDFTKDDENINSQPFMRWKQRFDFVQEATLKAEAETGERKGHYLNVTAPTPDEMMKRAEYAKEIGAPIIMHDYITGGFCANTGLAQWCRDNGMLLHIHRAMHAVLDRNPHHGIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFVPEDRSRGIFFDQDWGSMPGGFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTLGHPWGNAAGAHANRVALEACVQARNEGRAIEKEGKEVLTAAAAHSPELKIAMETWKEIKFEFDTVDKLDIANK*