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SCN18_30_10_14_R3_B_scaffold_870_23

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(18955..20793)

Top 3 Functional Annotations

Value Algorithm Source
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] id=12498504 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 612.0
  • Bit_score: 1247
  • Evalue 0.0
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 610.0
  • Bit_score: 833
  • Evalue 1.30e-238
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 610.0
  • Bit_score: 833
  • Evalue 2.60e-239

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGTACCATTCGCCGATGCTGAAAACCATTGAACCCGCGTCGCTGCAGCTTCGCGACGGCATTCCGTATTCCGCCGCCTACGGCGACGTGTACCACTCGGCCGACGGCGGCACGGGGCAGGCGCGGCACGTTTTCCTGCAGGGTTGCGGCCTGCCGGACGCCTGGGCCGGCCGACCGCATTTCGCCATCCTCGAAACCGGCTTCGGCACCGGGCTCAATTTTCTCGTTACCTGGGCGGCCTGGCGCGCCGATCCGGCGCGCGGTGCACGGCTGCATTTCTGTTCGGTGGAAAAACATCCCTTCCGCGCCGAAGACCTGGCGCGTCTGCATGCGCAGTGGCCGGCGTTCGCCGGGCTGTCCGCCGAACTTGCCGCCCATTGGCCGCCGGCCGTGCCGGGTTTTCACCGGCTGGCGCTCGACGGCGGCCGGGTGCTGCTCACGCTGATGTTCGGCGAGGCGGCGGACTGCCTGCCGCAGCTCGACGCGCGCATCGATGCCTTCTATCTCGACGGCTTCGCGCCCGACCGCAACGCCGATCTCTGGCAACCCGCACTGTTCGCCGAACTCGCACGGCTGGCCCGGCCCGGCGCGGCGGCGGCGACCTACACCGTGGCCGGTCCGGTGCGGCAGGGGCTGGCCGAGGCCGGTTTCGTCTGCGACAAACGCGCGGGCTATGGTCGCAAGCGGCATTGCCTCGTCGCGCGTTTTCGCGGCGAACGGGAAGCGGGGCGCTGCCCGCCGCAGCGCGTCGCTGTGGTCGGCGCCGGCGTGGCCGGTGCCGCGGTCGCGCATGCGCTGGCGCAACGCGGCACCGAGGCCGTCGTGCTGGAACGGACCGGGGCGCCGGCGCAAGGCGCATCGGGCAATCCGGCCGCGGTATTCCGGCCGGTGATTTCGCGCGACGACAACCGTGCGACCCGGCTTACCCGCGCCGCCTTTCTGCACGACCTGCGCGCCTGGCGTGCGCTCGACGGGCTCGACTGGGCGACTTGCGGCGTGCTGCATCTGGCGAAGGATGCCGAAGCCGAGGCCCGGTACCGGGTGGCGCTCGACGCCGCCGCGCCGCCGCCGGACTATGCCCGCTGGGTCGAACGCGACGAAGCTTCGGCGTTGGCGAACTGGCCGGTGGCGGCAGCCGGGGTGTTCTATCCGCAGGCGGGCTGGGTGGTGCCACAAAGCCTGTGCGCGGCCTGGCTCGCGCAGGGCGGTATCGCGCTGAAACTCAATGCAAGCGTGGCACGGCTCGAAGCCGGCCCCGCGGGCTGGCGCGTATTCGACGCGACTGGCGCGGTGCTCGCCGACGCCGACGCCGTGGTGCTGGCCAACGCGCGCGACGTGCAAACCCTGCTGCCGGACGGCGGCTGGCCGATCCACGACGTGCGCGGCCAGATTACCCGGCTGCCGGCCGGGAGCCTGCCGTGGCTCGAACGGGTGATCGCACGCGAAGGCTACTGTGCGCCGGGGGACCGGCCGCTGGTCGGTGCCACTTACGAGCACGACGACCTCGACCTCGCGCCGCGCGCGGCGAGCGATGCGGCCAATCTGGCGCGGCTGGAATCGATTCTGCCGGGCGCTGCCGCCGGGTTCGACCCGGCCACGCTCGACGGCCGTGCCGCGCTGCGCGCGACGCTGCCGGACCGGCTGCCCCTGCTCGGTGCTGTCGAGGGGCATACGGGCCTGTACGTCGCGGCGGGCTATGCCTCGCGCGGCGTCGTGTGGGCCGGGCTGCTGGGCGAGGCGCTGGCGGACCGTCTGTGCGGTGAGCCCCTCCCGCTGGAGGCCGATCTGCTCGCAGCCGTTTCACCCGGCCGTTTTGCCCGGCCGTTGCGGGGCCGCTGA
PROTEIN sequence
Length: 613
MYHSPMLKTIEPASLQLRDGIPYSAAYGDVYHSADGGTGQARHVFLQGCGLPDAWAGRPHFAILETGFGTGLNFLVTWAAWRADPARGARLHFCSVEKHPFRAEDLARLHAQWPAFAGLSAELAAHWPPAVPGFHRLALDGGRVLLTLMFGEAADCLPQLDARIDAFYLDGFAPDRNADLWQPALFAELARLARPGAAAATYTVAGPVRQGLAEAGFVCDKRAGYGRKRHCLVARFRGEREAGRCPPQRVAVVGAGVAGAAVAHALAQRGTEAVVLERTGAPAQGASGNPAAVFRPVISRDDNRATRLTRAAFLHDLRAWRALDGLDWATCGVLHLAKDAEAEARYRVALDAAAPPPDYARWVERDEASALANWPVAAAGVFYPQAGWVVPQSLCAAWLAQGGIALKLNASVARLEAGPAGWRVFDATGAVLADADAVVLANARDVQTLLPDGGWPIHDVRGQITRLPAGSLPWLERVIAREGYCAPGDRPLVGATYEHDDLDLAPRAASDAANLARLESILPGAAAGFDPATLDGRAALRATLPDRLPLLGAVEGHTGLYVAAGYASRGVVWAGLLGEALADRLCGEPLPLEADLLAAVSPGRFARPLRGR*