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SCN18_25_1_16_R1_B_scaffold_150_22

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 24299..25426

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IN26_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 377.0
  • Bit_score: 527
  • Evalue 6.60e-147
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF85305.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 377.0
  • Bit_score: 527
  • Evalue 9.20e-147
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 377.0
  • Bit_score: 519
  • Evalue 5.10e-145

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGGCAAAGCGTGGTTTGATCGTTGTGGCGGTGCTGCTGGCGGCCGGGGGTGTTGCGGCCTACCAGACCCGTGCGTCCTGGTATGGTGGCGAGACCGTCGCCAAGCAGACGTCGCCGCGGAAAGTCGCCGTGGAAGTTGCCAAGGCGGTGAAGCAGCCGGTTCCCGTCGATGTCGAGGCGATCGGGACGGTGACGCCGATCTCCAGCGTGGCACTGAAGTCGCGTATCGAAACCACCATTATCGGCGTGCATTTCGAGGACGGCGCGCGGGTCAAGCAGGGTGATCTCCTGTTCACCCTCGATGCGCGACAGATCGATGCACAGGTCGAGCAGGCGGAAGGAACGCTGGCGCGCGACCGCGCTCAACTCGCCGGCGCCCAGCGCGACCTCAATCGCTACAGCGAATTGATCGGCAAGGGCGCGACCACCCAGGTCAATCTCGACAATGCCAAGACGCAAGCCGACATCCTGATCGGAACCATCAAGGCCGATCAAGCCGCGCTGGATAATCTGCGAGTGCAGAAAAGCTACACTGTCATCCGCGCACCGTTTGACGGCCGCATCAGCGCCGCTGCCGTGAAGGTCGGGAATTTTGTGCGCCCTGCCGACACCGCGCCGCTTGCGATCATCAACCAGATGGCGCCGGTCTATGTCACGTTCGCCGTGCCGCAAGCTGTCCTGAGCGATCTGCGCGATGCCATGACGGCCGGTTCGGCGCAGGTGATTGCCACAGTGCCGGGTCGTGAAGCCTCCGAGCAGGGCAAGGTGGCTATGGTCGAGAACACCGTCGATGCCACCACGGGCATGGTGACGGTACGCGGCATCATGGACAACGGCCGCGAGGCGCTGTGGCCCGGAACGCTGGTCAATACCCGCCTGATCGTGCGTCGCGAGAACGCCGTTGTCGTCCCTTCGGCAGCGGTGCAACGCAGCCAGAAGGGTGATTTTGTTTTTGTCGTTGCCGATGGCAAGGCCAAGGTGCAGCCGGTGACTGTGTCCCGTACATCTTCCGGCAGTTCTGTCCTTGCCGGCGGGCTGAAGGGTGATGAAGACGTCGTCGTCGAGGGGCAATTGCTGCTTCGCGACGGCACGCTGGTCCAGATGCGGGAACGCAAGGCGGGGGCCTGA
PROTEIN sequence
Length: 376
MAKRGLIVVAVLLAAGGVAAYQTRASWYGGETVAKQTSPRKVAVEVAKAVKQPVPVDVEAIGTVTPISSVALKSRIETTIIGVHFEDGARVKQGDLLFTLDARQIDAQVEQAEGTLARDRAQLAGAQRDLNRYSELIGKGATTQVNLDNAKTQADILIGTIKADQAALDNLRVQKSYTVIRAPFDGRISAAAVKVGNFVRPADTAPLAIINQMAPVYVTFAVPQAVLSDLRDAMTAGSAQVIATVPGREASEQGKVAMVENTVDATTGMVTVRGIMDNGREALWPGTLVNTRLIVRRENAVVVPSAAVQRSQKGDFVFVVADGKAKVQPVTVSRTSSGSSVLAGGLKGDEDVVVEGQLLLRDGTLVQMRERKAGA*