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SCN18_25_1_16_R1_B_scaffold_229_5

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 1652..2185

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKA6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 319
  • Evalue 1.30e-84
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 177.0
  • Bit_score: 320
  • Evalue 1.10e-84
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 318
  • Evalue 6.20e-85

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGAGTTGGCAAGAAGCCCGTCGTGGTTCCGTCCGGCGTGACGGCGGCCGTCGAGGGCCAGACCGTCAAGATGAAGGGGCCGAAGGGCCAGCTTCAGTTCGTCGTCCACGACGACGTCGAGGTGAAGTTCGAGGACGGCGCCGTCAAGGTTGCGCCGCGTTTCGAGACCAAGCGGGCGCGTTCGCTGTACGGCACCGCGCGTGCGCAGGTGGCGAACCTGGTCGAGGGCGTCACCAAGGGCTTCGAGAAGAAGCTGGAAATCACCGGCGTCGGTTATCGCGCCGCGTTGCAGGGTAAGAGCCTGCAACTCGCGCTCGGCTACAGCCACGACGTGGTGTATGCGATCCCGGAAGGCATCGCCATCACCGTGCCGAAGCCGACCGAGATCGTGATCGCCGGCAACGATTCGCAGCGCGTCGGTCAGGTTGCCGCCGAAATCCGCGGTTATCGTCCGCCGGAGCCGTACAAGGGCAAGGGCGTGCGCTACGCCGATGAATTCATCTTCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRVGKKPVVVPSGVTAAVEGQTVKMKGPKGQLQFVVHDDVEVKFEDGAVKVAPRFETKRARSLYGTARAQVANLVEGVTKGFEKKLEITGVGYRAALQGKSLQLALGYSHDVVYAIPEGIAITVPKPTEIVIAGNDSQRVGQVAAEIRGYRPPEPYKGKGVRYADEFIFRKEGKKK*