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SCN18_25_1_16_R1_B_scaffold_480_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(1102..2223)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IT91_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 371.0
  • Bit_score: 641
  • Evalue 3.10e-181
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 371.0
  • Bit_score: 641
  • Evalue 8.80e-182
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:ERF86064.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 371.0
  • Bit_score: 641
  • Evalue 4.30e-181

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAAATCTTTGAAGCTGATCGGCCTGGCCCTAAGTGCGACATTGGGCGCCTCGCTGGCGCTCTCGACCACGACCTTCGCCCAGGACATCACCGTCGCGGTGGCCGGCCCGATGACCGGCAGCGAGTCCGCGTTCGGCCGCCAGTTGCAGAACGGCGCCGAGCAGTTCGTCGCCGATGCCAACGCCGCCGGCGGGCTCTTGAACAAGAAGCTGAAGCTGTTCGTCGGCGACGATGCCTGCGATCCGAAGCAGGCGCGCTCCATCGCCGAGAAGATCGGCAGCCAGGGCATCCCGTTCGTCGCCGGACACTTCTGCTCGTCGTCGTCGATCCCGGCGTCGGAAGCCTATGCCGACAGCAACGTGTTGCAGATCACCCCGGCCTCGACCAACCCGCTGTTCACCGAACGCAAGCTGTGGAACGTGCTGCGCATCTGCGGCCGCGACGATCAGCAGGGCGTGGTCGCCGCGCGCTACATCGCCAAGCATTTCGCCGGCAAGAACGTCGCGATCCTCAACGACAAGACCACCTACGGCAAGGGTCTCGCCGATGAGACCAAGAAGGCGCTCAACAAGGCCGGTTTCCAGGAGAAGATGTTCGAGTCCTACAACAAGGACGACAAGGACTTTAACTCCATCGTCTCGCGGCTGAAGCGCGACAACATCGATCTCGTCTACATCGGCGGCTATCACCAGCAGGCCGGTCTGATCCTGCGCCAGATGCGCGACCAGGGCCTCAAGACGGTGATGATGTCCGGCGACTCGATGAACGACAAGGAGTTCGCCTCGATCACCGGCCCGCAGGCCGAGGGCACGCTGTTCACCTTCGGCCCCGACCCGCGCAACAAGCCGACCGCGAAAGCCATCGTCGAGGAGTTCAAGAAGAAGGGTATCGATCCGGAAGGCTACACGCTCTACACCTACGCCGCGATGCAGGTGTGGACCGAGGCCGTCAAGAAGGCCGTCACCACCGATCCGCAGAAGGTGATGAAGGTGATCAAGGACGGCGAATGGGACACCGTGCTCGGCAAGCTCGGCTTCGACGCCAAGGGCGACATCAAGGCGATCGACTACGTCGTCTACAAGTGGGACGCCAAGGGCAACTACGCCGAGATCCCGAACTGA
PROTEIN sequence
Length: 374
MKSLKLIGLALSATLGASLALSTTTFAQDITVAVAGPMTGSESAFGRQLQNGAEQFVADANAAGGLLNKKLKLFVGDDACDPKQARSIAEKIGSQGIPFVAGHFCSSSSIPASEAYADSNVLQITPASTNPLFTERKLWNVLRICGRDDQQGVVAARYIAKHFAGKNVAILNDKTTYGKGLADETKKALNKAGFQEKMFESYNKDDKDFNSIVSRLKRDNIDLVYIGGYHQQAGLILRQMRDQGLKTVMMSGDSMNDKEFASITGPQAEGTLFTFGPDPRNKPTAKAIVEEFKKKGIDPEGYTLYTYAAMQVWTEAVKKAVTTDPQKVMKVIKDGEWDTVLGKLGFDAKGDIKAIDYVVYKWDAKGNYAEIPN*