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SCN18_25_1_16_R1_B_scaffold_484_11

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(12363..12986)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=uncultured proteobacterium RepID=R4N1D5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 190.0
  • Bit_score: 122
  • Evalue 2.70e-25
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 205.0
  • Bit_score: 105
  • Evalue 1.30e-20
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 204.0
  • Bit_score: 140
  • Evalue 1.70e-30

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCGAAGACACCCCGCAAGGAGCCCCGCGCCGATAAAAAGGCAATGGCTGCGGAAACCCGGAGCGCCATCCTGCGCGCCGCGCAAAAGCTGTTTTCAACGAAGGGCTTTTTCGACACCACCATCGCCGACATCGTCGACAAGGCCGGCGTCAGCCGGGGCACGTTCTATCTTTATTTCAAGGACCGCGAGCAGATCTTCGCGACCCTGCTCTCGCAAGCGGTCGATGAAATGTTCTCGTTGTCGGCATCGCGCCCGACCGGCTCGCGCCAGACCCGGATCGAGAGCGCCAACCGTGCTTATCTCGAGACATTCAAACGCCACCGCGCCTTCATGCGCAGCGCGTTGCAGGTCGCGACCTTCGATGCCGGCGTCGCCAAGGCGTTGAGCGAATTGCGCGGCAAGTTCATCGACCGCATCCGGACCCATCTCGAACGATCCGTCGCACGCGGCGAATGTCACGACATCGATCCCGCGATCACGTCGTTCTTGCTGGTGATCATGGTGGAGTTCACCGCCTATTCCTGGCTGTCGTTCGGCTGGCAGCCGGACAAGGACGACTTCGATCTCGACAAGGTGGTGAAGGAAGCCAGCGCACTGTGGTCTCGCGCCGTCTATAAATAA
PROTEIN sequence
Length: 208
MAKTPRKEPRADKKAMAAETRSAILRAAQKLFSTKGFFDTTIADIVDKAGVSRGTFYLYFKDREQIFATLLSQAVDEMFSLSASRPTGSRQTRIESANRAYLETFKRHRAFMRSALQVATFDAGVAKALSELRGKFIDRIRTHLERSVARGECHDIDPAITSFLLVIMVEFTAYSWLSFGWQPDKDDFDLDKVVKEASALWSRAVYK*