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SCN18_25_1_16_R1_B_scaffold_409_30

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 33751..34707

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID95_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 318.0
  • Bit_score: 393
  • Evalue 1.30e-106
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 318.0
  • Bit_score: 393
  • Evalue 3.50e-107
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS65988.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 318.0
  • Bit_score: 393
  • Evalue 1.80e-106

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
TTGACTGTCGGTATTCGTCCCCAGGTCGATGGCACACTGCAGGACGTGCTGTTCACCGAAGGGCAGGATGTAAAGAAGGGCGACGTGCTGGCCAAGATAGATCCGCGCTTGTTCAAGGCTGCGCTTGACCAGGCCCGGGGAAAAAAAGCCCAGGATGCTGCGTTGCTCGTTTCCGCCGAGAAAGATCTTACGCGGTACAAGACGTTGGCGCTGAGTGATTCCATAGCGCGGCAGACCGTCGATCACCAGCAGGCAACGGTCGATCAACTGAAGGCGTCCATTGCGGCCGATGAAGCTGCGATCGACACCGCACAGACACAACTCGATTACACTTCGATCAGGGCGCCAAGCGACGGACGAATTGGCATTCGCTCGATCGATCCCGGGAACGTGGTGCATGTGTCCGACGCACAACCGATCGTCATCCTGATGCGGATCCGCCCGTCCGCTGTGCTGTTCACACTGCCGGCGCGGTTTCTCGATGATGTGCGCAGCGCCTTAGCCCATGGTCCCGTCGTGGTGACGGCTTTCGACCAAAACAACCGCCGCGCACTGAGCGCGGGGAAACTCCTCCTCGTCGATGATGCAATCGATCCCGCTACCGACACCATGCGTCTGAAGGCCATCTTCCCTAATGACGACGAAAGGCTGTGGCCGGGCGAATTTGTTAATGCACGCTTGTCACTCAAGACGCTCAGCGATGCTCTCGTCATTCCATCGAGCGCGGTCCAACGGGGTCCGCAGGGCTTGTTCGTGTGGGTCGTGACGTCGAAAGACACGGCTGAACCCCGGCCGATCGAGGTCGGGCCGACGACTGGCGATCTGACAGTGGTCACTTCGGGCGTTAGCGACGGCGAACGCGTCGTGACGGACGGACAATTCAAGCTGAAGCGCGATGCTAGGGTACAGGTAAGGAGCACGTCACCCCGGTCACCAACGTCCGAGGGTGCGAGGTGA
PROTEIN sequence
Length: 319
LTVGIRPQVDGTLQDVLFTEGQDVKKGDVLAKIDPRLFKAALDQARGKKAQDAALLVSAEKDLTRYKTLALSDSIARQTVDHQQATVDQLKASIAADEAAIDTAQTQLDYTSIRAPSDGRIGIRSIDPGNVVHVSDAQPIVILMRIRPSAVLFTLPARFLDDVRSALAHGPVVVTAFDQNNRRALSAGKLLLVDDAIDPATDTMRLKAIFPNDDERLWPGEFVNARLSLKTLSDALVIPSSAVQRGPQGLFVWVVTSKDTAEPRPIEVGPTTGDLTVVTSGVSDGERVVTDGQFKLKRDARVQVRSTSPRSPTSEGAR*