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SCN18_25_1_16_R1_B_scaffold_1976_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 160..1029

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KGF7_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 278.0
  • Bit_score: 238
  • Evalue 6.10e-60
putative site-specific integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 278.0
  • Bit_score: 238
  • Evalue 1.70e-60
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 278.0
  • Bit_score: 238
  • Evalue 8.60e-60

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Taxonomy

SCNpilot_P_inoc_Rhodobacter_64_50 → SCNpilot_P_inoc_Rhodobacter_64_50 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCTGCCTACGGTGCTGATCTCGAAAAATATCTGTGCTGGCTCTCGGCCAACGATCTGACGCTCCGGAACGTAACGGAAAGCGGCATCCTGAAGTTTCTCGCCTCGCTTGAGAGCGCGGGAGCGGCTGAAACGTCACTGAGACGATTGAGAACAACGATCAAACAGATCCATTCCTTTCTGGTGGCGGAAAGTCATTGTGCGTCGAATCCTTCGGCGCGTTTCGAACGCTTGCCCAGGATTAAGGCATCGCCATACATCATGCATATGGAAGACGTGGACCGCCTCCTTGAAACCGCTCATCAACTGGCCGCCGACGTTGACTTCGGACCCCGTCGGCAAGCGGGCTACGCCCGGCGAGCCGCCCTGCTTGAGACCCTCTACGCTTCCGGAATGCGGATTGGCGAGGTGATCTCCCTGCCCGCCAGTTGTATCAGACCGGACGCCAGATCCCTCGTCATCAACGGTCGAGGCGGCAAGCGGCGGATGGTACCCCTTCATACGAAAGCGGTCGAAGCGATCATGAGATGGAAACGCATGGCTGAAACAATCGGATTACCGCCGTCCGAATGGGCGTTTCACTCCATCAAGAACGTCGATGCTCATGTGACCCGACAAACTGCTTTTGGCGAAATCAAGGAAATCGCAGTGATCGCAGGGATTCCGGAAGCACACAGGGTTTCACCTAAATCCCTGCGACATGCGTTCGGTGCGCATCTTTTACAAAATGGCGCGGACCCGAGTTCGGTTCAGGCAATGCTTGGACATGCTGAGTTGGGGTCGATGGACGTATATACGAAAGCGGCACAGGATACGAAACTTGCAAGCATGGGGAAGCACCCGTTGATGGATGTCTTGGAAAATTCTTAA
PROTEIN sequence
Length: 290
MAAYGADLEKYLCWLSANDLTLRNVTESGILKFLASLESAGAAETSLRRLRTTIKQIHSFLVAESHCASNPSARFERLPRIKASPYIMHMEDVDRLLETAHQLAADVDFGPRRQAGYARRAALLETLYASGMRIGEVISLPASCIRPDARSLVINGRGGKRRMVPLHTKAVEAIMRWKRMAETIGLPPSEWAFHSIKNVDAHVTRQTAFGEIKEIAVIAGIPEAHRVSPKSLRHAFGAHLLQNGADPSSVQAMLGHAELGSMDVYTKAAQDTKLASMGKHPLMDVLENS*